Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486052
Identifier: 103486052
GI number: 103486052
Start: 573703
End: 573936
Strand: Direct
Name: 103486052
Synonym: Sala_0559
Alternate gene names: NA
Gene position: 573703-573936 (Clockwise)
Preceding gene: 103486051
Following gene: 103486055
Centisome position: 17.15
GC content: 70.09
Gene sequence:
>234_bases ATGACCGACCAAGCCCCGCCGCCCGCCGACGACGAAGCCCAGGAAAATGAAGTGCTGCGCGCCGCGCGCGAGCTGCAACA GCAGCGCGAGGCGGCCGAAGCCGCCGAGGCCGCTGACAAGGAGGCGGGCAAGTCCAGACGCGGCTGGAAAACCGCGGCGG CGGCGGGGCTCGGTATTGGCTCGGCGGCGGTGATCGCGGCGCTGCTCTACGCCAATCGCGGCAAGATCAAATAG
Upstream 100 bases:
>100_bases GAATGGTAAGGTGACGTTCGAAGCCGTAGCGGAAGCGATCGGAACCGATTATGTGCCTGTCGAACAGGCACTCGACTGAC GACAAGGACCATGAAGCCAG
Downstream 100 bases:
>100_bases CACCCGGCGCGCCCCGGACCTGAAAACAAGAAAAGGGCGGCCATCATGCCGCCCTTTTCTGTGCGTGGAGCCGATGGATC AGGCCGCCTGTTGCAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTDQAPPPADDEAQENEVLRAARELQQQREAAEAAEAADKEAGKSRRGWKTAAAAGLGIGSAAVIAALLYANRGKIK
Sequences:
>Translated_77_residues MTDQAPPPADDEAQENEVLRAARELQQQREAAEAAEAADKEAGKSRRGWKTAAAAGLGIGSAAVIAALLYANRGKIK >Mature_76_residues TDQAPPPADDEAQENEVLRAARELQQQREAAEAAEAADKEAGKSRRGWKTAAAAGLGIGSAAVIAALLYANRGKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8045; Mature: 7914
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQAPPPADDEAQENEVLRAARELQQQREAAEAAEAADKEAGKSRRGWKTAAAAGLGIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC SAAVIAALLYANRGKIK HHHHHHHHHHHCCCCCC >Mature Secondary Structure TDQAPPPADDEAQENEVLRAARELQQQREAAEAAEAADKEAGKSRRGWKTAAAAGLGIG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC SAAVIAALLYANRGKIK HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA