Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486010

Identifier: 103486010

GI number: 103486010

Start: 535398

End: 535676

Strand: Direct

Name: 103486010

Synonym: Sala_0517

Alternate gene names: NA

Gene position: 535398-535676 (Clockwise)

Preceding gene: 103486009

Following gene: 103486016

Centisome position: 16.01

GC content: 63.44

Gene sequence:

>279_bases
ATGAAAGCGCGAATCTACCAGAAGCCCAAAAATGCGATGCAGTCGGGGCGTGCGGGAACCGGGCGCTGGATGCTGGAGTT
CGCCCCCGCCGAGGCGCGCAAGCCCGACCCACTGATGGGTTGGGCGGGCAGCGGCGATACGCAGCGCCAGCTTCGCCTGA
GCTTTGCGAGCCGCGAGGAAGCGGTCGCCTATGCGGAAAAATATGGCATCGATGCGGAGGTCATGCCGACGCCCGTGCGC
AAGCTGAAGATCCAAGCCTACGCCGACAATTTCCGGTAA

Upstream 100 bases:

>100_bases
CCAAGGCGGCGCAGGCGCGGCGCGAGGGTCAATAGCCCCTTTTCGCCCGCGCTCCCTGGCGCTAAGGCGGCGGCAGAAAC
ATCCGGTCAGGGACTCTCCG

Downstream 100 bases:

>100_bases
CGATCGCTCGATCGGATTGGATCGAGCCACCCTTCCTTATGTTGTCATCCCGGCGAAGGCCGGGATCTCGCCGTTGCGGC
AGGATGCGAGGGCGAGATTC

Product: ETC complex I subunit region

Products: NA

Alternate protein names: ETC Complex I Subunit Conserved Region; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; ETC Complex I Subunit Conserved Region Superfamily; Oxidoreductase Protein; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Fe-S; ETC Complex I Subunit Protein; NADH Dehydrogenase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKARIYQKPKNAMQSGRAGTGRWMLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREEAVAYAEKYGIDAEVMPTPVR
KLKIQAYADNFR

Sequences:

>Translated_92_residues
MKARIYQKPKNAMQSGRAGTGRWMLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREEAVAYAEKYGIDAEVMPTPVR
KLKIQAYADNFR
>Mature_92_residues
MKARIYQKPKNAMQSGRAGTGRWMLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREEAVAYAEKYGIDAEVMPTPVR
KLKIQAYADNFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4505369, Length=90, Percent_Identity=40, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI18860539, Length=94, Percent_Identity=39.3617021276596, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10379; Mature: 10379

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARIYQKPKNAMQSGRAGTGRWMLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREE
CCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHCCHH
AVAYAEKYGIDAEVMPTPVRKLKIQAYADNFR
HHHHHHHHCCCCCCCCCCCHHEEEEEECCCCC
>Mature Secondary Structure
MKARIYQKPKNAMQSGRAGTGRWMLEFAPAEARKPDPLMGWAGSGDTQRQLRLSFASREE
CCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHCCHH
AVAYAEKYGIDAEVMPTPVRKLKIQAYADNFR
HHHHHHHHCCCCCCCCCCCHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA