Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is pagO [H]

Identifier: 103485990

GI number: 103485990

Start: 514856

End: 515815

Strand: Direct

Name: pagO [H]

Synonym: Sala_0497

Alternate gene names: 103485990

Gene position: 514856-515815 (Clockwise)

Preceding gene: 103485989

Following gene: 103485991

Centisome position: 15.39

GC content: 67.4

Gene sequence:

>960_bases
ATGAGCGCCGCGCCGACGACGCTGCTCAGCCCGCGCGTCCTGTTGCCCTTTCTTCTGGTGACGCTGATCTGGGGGTCGAC
GTGGATCGTCATCAAGGGACAGCTCGGCGTCGTGCCGCCCAGCTGGTCGGTGACCTATCGCTTCGCCATCGCCGCCGCGG
CGATGTTCGCCTTTGCGCTCATCCGCGGCGAGCGGCTGCGGCTCGACAAGCGCGCGATGCTCTTCGCCGCGGCACTTGGG
GTCGCGCAATTCGCCCTGAACTTCAACTTCGTCTACCGGGCGGAGCAGCATATCACGTCGGGCCTTGTCGCGGTGCTGTT
CGCGCTGCTGATCGTTCCCAATACGTTGATGGGACGCGCTTTCCTCAAGACACCGCTGGAGGGGCGCTTTCTGCTCGGCG
CGGGGATCGCGATCGTCGGCGTGGGCCTGATGATCCTGCACGAATATCGCGCCGCGGCGCTGGGCGCGGGCGAGGTGCTG
CTCGGCACCGCGCTGACGCTCGCTGGCGTGATGAGCGCCTCGATCGCCAATGTCATGCAGGGCACCGCGATCGCGCGCGC
GCAATCAATGGTCGTGATGATCGGCTGGGCGATGCTGTTCGGCGCGCTCGCCGACGGCGCCTGGGCGTGGATCACCACCG
GCCCGCCGGTGGTCGAGCCGACGGCGGTGTATCTGGGCGGCGTTCTCTATCTGGGCGTCGTCGCCAGCGCCGTGACCTTC
CCCCTCTACTTCAACGTCATCCGTGCGGTCGGGCCGGGGCAGGCGGCGTGGTCGAGCGTGCTCATCCCGATCATCGCGAT
GGGCTTTTCGACGGCGTTCGAGGATTATCGCTGGGCGATGCTGTCGGTCGCGGGCGGTATCGTCGCGCTGATCGGGCTGG
TGATCGCGGTCGCCAGGCGTCCCGAGCGTCCGTCGGTCAGCGGCAATATGGTGTCTTTGCCGGTCGATTCCGACGGTTGA

Upstream 100 bases:

>100_bases
TCGATTTTTACGACTGGGGTGAGGGTGCGGCGCGGCTCGTCGTCAGCTGGGATCAGGATGCCGAAGCGGTGGCGCCGCTC
GCCGCCGCGATCGGTGCGCT

Downstream 100 bases:

>100_bases
TCGAAAGCCGTTGCGACGGCGCCGGGGCGGACGCTAAGGCGCTGCCATGATACGCAAACTTCTCGTTTTCGCCGTCGCGG
CGACTCTTGCTCAGCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSAAPTTLLSPRVLLPFLLVTLIWGSTWIVIKGQLGVVPPSWSVTYRFAIAAAAMFAFALIRGERLRLDKRAMLFAAALG
VAQFALNFNFVYRAEQHITSGLVAVLFALLIVPNTLMGRAFLKTPLEGRFLLGAGIAIVGVGLMILHEYRAAALGAGEVL
LGTALTLAGVMSASIANVMQGTAIARAQSMVVMIGWAMLFGALADGAWAWITTGPPVVEPTAVYLGGVLYLGVVASAVTF
PLYFNVIRAVGPGQAAWSSVLIPIIAMGFSTAFEDYRWAMLSVAGGIVALIGLVIAVARRPERPSVSGNMVSLPVDSDG

Sequences:

>Translated_319_residues
MSAAPTTLLSPRVLLPFLLVTLIWGSTWIVIKGQLGVVPPSWSVTYRFAIAAAAMFAFALIRGERLRLDKRAMLFAAALG
VAQFALNFNFVYRAEQHITSGLVAVLFALLIVPNTLMGRAFLKTPLEGRFLLGAGIAIVGVGLMILHEYRAAALGAGEVL
LGTALTLAGVMSASIANVMQGTAIARAQSMVVMIGWAMLFGALADGAWAWITTGPPVVEPTAVYLGGVLYLGVVASAVTF
PLYFNVIRAVGPGQAAWSSVLIPIIAMGFSTAFEDYRWAMLSVAGGIVALIGLVIAVARRPERPSVSGNMVSLPVDSDG
>Mature_318_residues
SAAPTTLLSPRVLLPFLLVTLIWGSTWIVIKGQLGVVPPSWSVTYRFAIAAAAMFAFALIRGERLRLDKRAMLFAAALGV
AQFALNFNFVYRAEQHITSGLVAVLFALLIVPNTLMGRAFLKTPLEGRFLLGAGIAIVGVGLMILHEYRAAALGAGEVLL
GTALTLAGVMSASIANVMQGTAIARAQSMVVMIGWAMLFGALADGAWAWITTGPPVVEPTAVYLGGVLYLGVVASAVTFP
LYFNVIRAVGPGQAAWSSVLIPIIAMGFSTAFEDYRWAMLSVAGGIVALIGLVIAVARRPERPSVSGNMVSLPVDSDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33534; Mature: 33403

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPTTLLSPRVLLPFLLVTLIWGSTWIVIKGQLGVVPPSWSVTYRFAIAAAAMFAFAL
CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
IRGERLRLDKRAMLFAAALGVAQFALNFNFVYRAEQHITSGLVAVLFALLIVPNTLMGRA
HCCCHHCHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLKTPLEGRFLLGAGIAIVGVGLMILHEYRAAALGAGEVLLGTALTLAGVMSASIANVMQ
HHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GTAIARAQSMVVMIGWAMLFGALADGAWAWITTGPPVVEPTAVYLGGVLYLGVVASAVTF
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
PLYFNVIRAVGPGQAAWSSVLIPIIAMGFSTAFEDYRWAMLSVAGGIVALIGLVIAVARR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PERPSVSGNMVSLPVDSDG
CCCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SAAPTTLLSPRVLLPFLLVTLIWGSTWIVIKGQLGVVPPSWSVTYRFAIAAAAMFAFAL
CCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
IRGERLRLDKRAMLFAAALGVAQFALNFNFVYRAEQHITSGLVAVLFALLIVPNTLMGRA
HCCCHHCHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLKTPLEGRFLLGAGIAIVGVGLMILHEYRAAALGAGEVLLGTALTLAGVMSASIANVMQ
HHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GTAIARAQSMVVMIGWAMLFGALADGAWAWITTGPPVVEPTAVYLGGVLYLGVVASAVTF
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
PLYFNVIRAVGPGQAAWSSVLIPIIAMGFSTAFEDYRWAMLSVAGGIVALIGLVIAVARR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PERPSVSGNMVSLPVDSDG
CCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9712687; 11677609 [H]