Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485983

Identifier: 103485983

GI number: 103485983

Start: 506982

End: 507839

Strand: Direct

Name: 103485983

Synonym: Sala_0490

Alternate gene names: NA

Gene position: 506982-507839 (Clockwise)

Preceding gene: 103485982

Following gene: 103485984

Centisome position: 15.16

GC content: 65.03

Gene sequence:

>858_bases
ATGAGGGGCTGGGAGGGTGTGCTGGAAACGATGACCGATCTTGCTCCCGCCCCGCCACCAACGCGCGTCTATCGCCACCG
GCTGCCCACGCGGATCTGGCACTGGGTCAACGCCGTCACCTTGCTCATCCTGCTGATGAGCGGGCTGATGATCTTCAACG
CGCACCCGCGCCTCTATTGGGGGCAATATGGCGCCAATGCCGATTATGCCTGGTTCGCGATCGGATCGACGGCAGACACC
GGCTATGTGCGCATCGGCGCCGCGCGGGTCGAGACCACCGGGCTGCTCGGTCGCTGGACCGATGCCGAGGGCGTGGAAAA
GACCTGGGCCTTCCCCGGCTGGGCGACGATCCCGACCAGCTACAGTCTTGCCGACGGGCGGCGCTGGCATCTGCTCTTCG
CGTGGGTGCTCGCGATCAGCCTGACGCTCTACATGCTGTGGACCGCGCTGGGCGGGCATCTGAAGAAGGATCTGCACGTC
CGCCGCGACGAATGGTCGCCGCGCCATATCTGGCACGAGATCAAGGATCATGCCCGGCTGCGCTTCCCGACCGGCGCGGC
GGCGGCGCGCTATAATATCCTCCAGAAACTCAGCTATATCGGGATCATCTTCATCCTGTTGCCGCTGATGATCGCCACCG
GGCTCACCATGTCGCCGGGGATCAACGCCGCGGCGCCGTGGCTGCTCGACCTGTTCGGCGGGCGCCAGTCGGCGCGCTCG
ATCCATTTCATTGGCGCCTGGGCGCTCGTCGCCTTCTTTCTTGTCCATATCGTCATGGTGATGCTCGCAGGGCCGGTGAA
CGAGCTAAGGTCGATGGTGACGGGCTGGTTCCGCCTGCCCGCGGAGAAGGCGAAATGA

Upstream 100 bases:

>100_bases
CAGCCTGCGCAGCCAGTATCGCGAAGCCTATGCGGCGGAGGTCGTCGCGTAACCAAATGGTGCCGGGAACCGAACCCTTT
TCAAGCCCGTTCCCTGAAGG

Downstream 100 bases:

>100_bases
GCGGGGTGATGATGCCGCGCCGCGAGCTGATCGTCCGCGCAGGCGGTCTCGCCGCCGCGCTGCCGCTGCTCGGCGCATGC
GATGCAATCAACGATGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane B-Type Cytochrome Protein; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; HupC/HyaC/HydC Family Protein; Cytochrome B/B6 Domain Protein; Transmembrane Cytochrome B-Type Protein; Sulfite Oxidase

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRGWEGVLETMTDLAPAPPPTRVYRHRLPTRIWHWVNAVTLLILLMSGLMIFNAHPRLYWGQYGANADYAWFAIGSTADT
GYVRIGAARVETTGLLGRWTDAEGVEKTWAFPGWATIPTSYSLADGRRWHLLFAWVLAISLTLYMLWTALGGHLKKDLHV
RRDEWSPRHIWHEIKDHARLRFPTGAAAARYNILQKLSYIGIIFILLPLMIATGLTMSPGINAAAPWLLDLFGGRQSARS
IHFIGAWALVAFFLVHIVMVMLAGPVNELRSMVTGWFRLPAEKAK

Sequences:

>Translated_285_residues
MRGWEGVLETMTDLAPAPPPTRVYRHRLPTRIWHWVNAVTLLILLMSGLMIFNAHPRLYWGQYGANADYAWFAIGSTADT
GYVRIGAARVETTGLLGRWTDAEGVEKTWAFPGWATIPTSYSLADGRRWHLLFAWVLAISLTLYMLWTALGGHLKKDLHV
RRDEWSPRHIWHEIKDHARLRFPTGAAAARYNILQKLSYIGIIFILLPLMIATGLTMSPGINAAAPWLLDLFGGRQSARS
IHFIGAWALVAFFLVHIVMVMLAGPVNELRSMVTGWFRLPAEKAK
>Mature_285_residues
MRGWEGVLETMTDLAPAPPPTRVYRHRLPTRIWHWVNAVTLLILLMSGLMIFNAHPRLYWGQYGANADYAWFAIGSTADT
GYVRIGAARVETTGLLGRWTDAEGVEKTWAFPGWATIPTSYSLADGRRWHLLFAWVLAISLTLYMLWTALGGHLKKDLHV
RRDEWSPRHIWHEIKDHARLRFPTGAAAARYNILQKLSYIGIIFILLPLMIATGLTMSPGINAAAPWLLDLFGGRQSARS
IHFIGAWALVAFFLVHIVMVMLAGPVNELRSMVTGWFRLPAEKAK

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32182; Mature: 32182

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGWEGVLETMTDLAPAPPPTRVYRHRLPTRIWHWVNAVTLLILLMSGLMIFNAHPRLYW
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
GQYGANADYAWFAIGSTADTGYVRIGAARVETTGLLGRWTDAEGVEKTWAFPGWATIPTS
CCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCC
YSLADGRRWHLLFAWVLAISLTLYMLWTALGGHLKKDLHVRRDEWSPRHIWHEIKDHARL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE
RFPTGAAAARYNILQKLSYIGIIFILLPLMIATGLTMSPGINAAAPWLLDLFGGRQSARS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHCCE
IHFIGAWALVAFFLVHIVMVMLAGPVNELRSMVTGWFRLPAEKAK
EHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MRGWEGVLETMTDLAPAPPPTRVYRHRLPTRIWHWVNAVTLLILLMSGLMIFNAHPRLYW
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
GQYGANADYAWFAIGSTADTGYVRIGAARVETTGLLGRWTDAEGVEKTWAFPGWATIPTS
CCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCC
YSLADGRRWHLLFAWVLAISLTLYMLWTALGGHLKKDLHVRRDEWSPRHIWHEIKDHARL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE
RFPTGAAAARYNILQKLSYIGIIFILLPLMIATGLTMSPGINAAAPWLLDLFGGRQSARS
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHCCE
IHFIGAWALVAFFLVHIVMVMLAGPVNELRSMVTGWFRLPAEKAK
EHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA