Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485975

Identifier: 103485975

GI number: 103485975

Start: 498075

End: 498794

Strand: Direct

Name: 103485975

Synonym: Sala_0482

Alternate gene names: NA

Gene position: 498075-498794 (Clockwise)

Preceding gene: 103485968

Following gene: 103485982

Centisome position: 14.89

GC content: 66.39

Gene sequence:

>720_bases
ATGGAAGAGCCGCTCGCCACGCCGACGCCCGGTTATGCGCACCGCGTCGCCATCTATGACATGGACCGCACGATCACCCA
CTCGGGGACGTACAGCGGCTTCCTCATTCATGTTGCGCTGCGGCGTCAGCCATGGCGATTGCTGCTTTTGCCGCTCATCG
GGCTGGCGGGCGCGGCCTATGCGCTGCGCCTGATCGATCGCGCGCGGTTGAAAGCGATCAATCTGCGGCTGCTCGTCGGC
AAGCGGTTTTCCCGCGCCGAAATCGCCCCGCTTGCCGAAAGCTATGCCGACAAAGTCGTCGCGTGCGGCGTGCATCCCGC
CGCGCTCGAACAGATTGCGGCGGACCGCGCGGCGGGATATCGGCTGCTGCTCGCGACCGCGTCGTTCCACCTTTATGTCG
ATGCGATCGCGCGGCGGCTGGGGATCGACGATGTGCTCGCCACACGGCTCGACGAGCCCGACGGCGCCGATCATATCCAC
GCGCGGCTGTCGGGCGACAATTGTTATGGCGATGCCAAGTTTGCGCGCATTTCGGGCTGGCTGACCGACAATGCGATCAC
GCGCGAGGACGCGCATATCCGGGCCTATTCGGACCATGTGTCCGATCATCCGATGCTGCGCTTCGCCGACGAAGCCGTCG
CGACGACGCCGTCGCGCGGGCTGAAGCGGCTGGCGCCGCGGATGGGGTGGCAGGTGGTCGACTGGCGGGCGCGAAAGTAG

Upstream 100 bases:

>100_bases
TGCGGGCGACATTGGATTATTTGCCGGGGCACGGCAAGCGAATCCATGGGACTTGTCGGCAGTGCTTGGCCGCGGCACCG
CCGCCTTCTATGAGGAAGCC

Downstream 100 bases:

>100_bases
GACGGCGGGTGGCTGTGCTGGAGGCGAAGGTCGGTTTTGGAGTGGTGAGCAGACGTTGAGAAATCCTCCCCATCACTTGC
GATGGGGAGGGGGACCGCCG

Product: HAD family hydrolase

Products: NA

Alternate protein names: Phosphoserine Phosphatase; HAD-Superfamily Subfamily IB Hydrolase; HAD-Superfamily Subfamily IB Hydrolase TIGR; HAD-Superfamily Hydrolase; Phosphoserine Phosphatase SerB; Hydrolase; Haloacid Dehalogenase-Like Family Hydrolase; HAD Superfamily Subfamily IB Hydrolase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MEEPLATPTPGYAHRVAIYDMDRTITHSGTYSGFLIHVALRRQPWRLLLLPLIGLAGAAYALRLIDRARLKAINLRLLVG
KRFSRAEIAPLAESYADKVVACGVHPAALEQIAADRAAGYRLLLATASFHLYVDAIARRLGIDDVLATRLDEPDGADHIH
ARLSGDNCYGDAKFARISGWLTDNAITREDAHIRAYSDHVSDHPMLRFADEAVATTPSRGLKRLAPRMGWQVVDWRARK

Sequences:

>Translated_239_residues
MEEPLATPTPGYAHRVAIYDMDRTITHSGTYSGFLIHVALRRQPWRLLLLPLIGLAGAAYALRLIDRARLKAINLRLLVG
KRFSRAEIAPLAESYADKVVACGVHPAALEQIAADRAAGYRLLLATASFHLYVDAIARRLGIDDVLATRLDEPDGADHIH
ARLSGDNCYGDAKFARISGWLTDNAITREDAHIRAYSDHVSDHPMLRFADEAVATTPSRGLKRLAPRMGWQVVDWRARK
>Mature_239_residues
MEEPLATPTPGYAHRVAIYDMDRTITHSGTYSGFLIHVALRRQPWRLLLLPLIGLAGAAYALRLIDRARLKAINLRLLVG
KRFSRAEIAPLAESYADKVVACGVHPAALEQIAADRAAGYRLLLATASFHLYVDAIARRLGIDDVLATRLDEPDGADHIH
ARLSGDNCYGDAKFARISGWLTDNAITREDAHIRAYSDHVSDHPMLRFADEAVATTPSRGLKRLAPRMGWQVVDWRARK

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26510; Mature: 26510

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEPLATPTPGYAHRVAIYDMDRTITHSGTYSGFLIHVALRRQPWRLLLLPLIGLAGAAY
CCCCCCCCCCCCEEEEEEEECCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
ALRLIDRARLKAINLRLLVGKRFSRAEIAPLAESYADKVVACGVHPAALEQIAADRAAGY
HHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCE
RLLLATASFHLYVDAIARRLGIDDVLATRLDEPDGADHIHARLSGDNCYGDAKFARISGW
EEEEEHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECE
LTDNAITREDAHIRAYSDHVSDHPMLRFADEAVATTPSRGLKRLAPRMGWQVVDWRARK
ECCCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MEEPLATPTPGYAHRVAIYDMDRTITHSGTYSGFLIHVALRRQPWRLLLLPLIGLAGAAY
CCCCCCCCCCCCEEEEEEEECCCEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
ALRLIDRARLKAINLRLLVGKRFSRAEIAPLAESYADKVVACGVHPAALEQIAADRAAGY
HHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHCCE
RLLLATASFHLYVDAIARRLGIDDVLATRLDEPDGADHIHARLSGDNCYGDAKFARISGW
EEEEEHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECE
LTDNAITREDAHIRAYSDHVSDHPMLRFADEAVATTPSRGLKRLAPRMGWQVVDWRARK
ECCCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA