Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485948

Identifier: 103485948

GI number: 103485948

Start: 466957

End: 467709

Strand: Direct

Name: 103485948

Synonym: Sala_0455

Alternate gene names: NA

Gene position: 466957-467709 (Clockwise)

Preceding gene: 103485943

Following gene: 103485949

Centisome position: 13.96

GC content: 68.53

Gene sequence:

>753_bases
ATGACGATCGACCCCCAATTTTTCGAGGCGCGCGACGGCGTGCGGCTGGCGTGGCGTGAAACGGGGGAAGGCCGGCCGGT
CGTGCTGCTCCATGGCCTGTTTTCGAGCGGCGAGGTCAATTGGATCAAGTTCGGCACCGCGGCGCGCATCGCGGCCGAGG
GCTATCGCGTCATCATGCCCGACCTGCGCGTCCATGGGTCGAGCGACGCGCCGCACGACGCGCAGCATTATCCGCCCGAC
GTGCTGGTCCGCGACGTGGAGGATCTGGTGGCGCATCTGGGCCTCGTCGATTTCGACCTCGGCGGCTTCTCGCTCGGCGC
GCGGACCAGCGTGCGTGCGGTCGTCGCGGGGATGAAGCCGCGGCGCCTGATTCTGGGCGGCATGGGGCTGGCGGGGCTCG
CCGGCTGGCAGCGGCGCGGGGCGTTTTTCCGGCGCGCAATCGCCGAATATGAAACGGCGAAGCGCGGCGACGACACCTGG
CTGTCGATCCAGTTCATGAAGACGATGAAGGTCGATCGCATCGCCGCGGGGCATTTGCTGGAAAGCTTTACCGACACGCC
GCCCGAGGCGCTGGCGGCGCTGACGATGCCGGTGCTTGTCGTCTGCGGCGAGCAGGATCAGGACAATGGATCGGCCGAGG
AGCTGGTCGCGGTGCTGGCCGATGCGCGGCTCGCGACGATTCCGGGGACGCACATGTCGAGCGTGACCGAGCCGGCGCTG
GGTGAGGCGATCGCGGCCTTCCTGACGGCTTGA

Upstream 100 bases:

>100_bases
CGTCGGTGTCGAGCGAGGTCGAGATGCTCAATCAACAGGGTTCGATCCCGCACCCGTTGCCCGGTTGCGTGAGCCCGCGC
GGAGCGGGTAAGGCGGGGCC

Downstream 100 bases:

>100_bases
CCCCGCCCGCATGGCGCGTCAAGCTGGCGCCATCGCGTTCCAGATCTCGATCTTTTCGACTGGCCGTAAAAAGTTTGGGT
GTCCCCGCGAAGGCGGGGAT

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Protein; Hydrolase Family Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Lysophospholipase; Chloride Peroxidase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTIDPQFFEARDGVRLAWRETGEGRPVVLLHGLFSSGEVNWIKFGTAARIAAEGYRVIMPDLRVHGSSDAPHDAQHYPPD
VLVRDVEDLVAHLGLVDFDLGGFSLGARTSVRAVVAGMKPRRLILGGMGLAGLAGWQRRGAFFRRAIAEYETAKRGDDTW
LSIQFMKTMKVDRIAAGHLLESFTDTPPEALAALTMPVLVVCGEQDQDNGSAEELVAVLADARLATIPGTHMSSVTEPAL
GEAIAAFLTA

Sequences:

>Translated_250_residues
MTIDPQFFEARDGVRLAWRETGEGRPVVLLHGLFSSGEVNWIKFGTAARIAAEGYRVIMPDLRVHGSSDAPHDAQHYPPD
VLVRDVEDLVAHLGLVDFDLGGFSLGARTSVRAVVAGMKPRRLILGGMGLAGLAGWQRRGAFFRRAIAEYETAKRGDDTW
LSIQFMKTMKVDRIAAGHLLESFTDTPPEALAALTMPVLVVCGEQDQDNGSAEELVAVLADARLATIPGTHMSSVTEPAL
GEAIAAFLTA
>Mature_249_residues
TIDPQFFEARDGVRLAWRETGEGRPVVLLHGLFSSGEVNWIKFGTAARIAAEGYRVIMPDLRVHGSSDAPHDAQHYPPDV
LVRDVEDLVAHLGLVDFDLGGFSLGARTSVRAVVAGMKPRRLILGGMGLAGLAGWQRRGAFFRRAIAEYETAKRGDDTWL
SIQFMKTMKVDRIAAGHLLESFTDTPPEALAALTMPVLVVCGEQDQDNGSAEELVAVLADARLATIPGTHMSSVTEPALG
EAIAAFLTA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26949; Mature: 26818

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDPQFFEARDGVRLAWRETGEGRPVVLLHGLFSSGEVNWIKFGTAARIAAEGYRVIMP
CCCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHCCCEEEEC
DLRVHGSSDAPHDAQHYPPDVLVRDVEDLVAHLGLVDFDLGGFSLGARTSVRAVVAGMKP
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCC
RRLILGGMGLAGLAGWQRRGAFFRRAIAEYETAKRGDDTWLSIQFMKTMKVDRIAAGHLL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
ESFTDTPPEALAALTMPVLVVCGEQDQDNGSAEELVAVLADARLATIPGTHMSSVTEPAL
HHHCCCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHCCCHHH
GEAIAAFLTA
HHHHHHHHCC
>Mature Secondary Structure 
TIDPQFFEARDGVRLAWRETGEGRPVVLLHGLFSSGEVNWIKFGTAARIAAEGYRVIMP
CCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHCCCEEEEC
DLRVHGSSDAPHDAQHYPPDVLVRDVEDLVAHLGLVDFDLGGFSLGARTSVRAVVAGMKP
CEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCC
RRLILGGMGLAGLAGWQRRGAFFRRAIAEYETAKRGDDTWLSIQFMKTMKVDRIAAGHLL
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
ESFTDTPPEALAALTMPVLVVCGEQDQDNGSAEELVAVLADARLATIPGTHMSSVTEPAL
HHHCCCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHCCCHHH
GEAIAAFLTA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA