Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485905

Identifier: 103485905

GI number: 103485905

Start: 420935

End: 421555

Strand: Direct

Name: 103485905

Synonym: Sala_0411

Alternate gene names: NA

Gene position: 420935-421555 (Clockwise)

Preceding gene: 103485904

Following gene: 103485906

Centisome position: 12.58

GC content: 57.65

Gene sequence:

>621_bases
ATGACGGCAAAGGGGGCGATGGAGGGAAAAAGGCCGCGCATTCGTGAGATCGTATGGCTCGCTGGCATCCTTGCCGCGTT
GGTCTTGGGATATGCGCTCTACCACCAGCTCTATGTCGGCGCGTCCAGCTTTCCTTTCGTGCAGGAAACTATCCTTGTCT
TCCTTGGCGCTCTCGCGACGATCTTTCTTACCGCGATGCTGCTCAACCGCCAGACCGAGCTCGAGCTCAGCAAGGAGGCC
CGCGTCCATCTGTTCGACCAGAAGAACTCGGTTTACATGTCGGCGATCGAAAAGGTCGCGGAAATCGCCGAACAACGCGA
TCCCGATCCGGCTCTCATCGATGAATTGCGGGTTATCGGACACAAACTGGCAGTGATCGCCAGTCCCGAGGTGATCAAGT
CCTTCCAGTCGGTGCTCGACAAGCTTATACGCGGATTACGGGACGGAAACCTGACCAATGCCGACGCAGAAGAGGTGATG
CACGCCGTCGCCGAGCTGACCATCGGAATGCGATCCGACATGCTTGACGAGATCGGGAGCGCCAAGAATGACACCGCACA
GGAACTGATCCGCCGCAACTCTCGGCAGATGGAACGGCTCGATGATCTGGACGAAGCGTAA

Upstream 100 bases:

>100_bases
CACATCGTGGATCGGTTGCTGCCACCGGGATAAATCACATGAGCCTATCCCGAAGTATCGCCACGGCACTGCACTGGCTT
CAGAGCGGGTCGGCAAGCAT

Downstream 100 bases:

>100_bases
CGGCCAGCAACGATAAAGCGTAAAGGACCTGAACATGCACAGAGGCCATAATCGTCCGCCGCGCCTATCGAAGCAGCCCG
GCACGAATACTATTTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTAKGAMEGKRPRIREIVWLAGILAALVLGYALYHQLYVGASSFPFVQETILVFLGALATIFLTAMLLNRQTELELSKEA
RVHLFDQKNSVYMSAIEKVAEIAEQRDPDPALIDELRVIGHKLAVIASPEVIKSFQSVLDKLIRGLRDGNLTNADAEEVM
HAVAELTIGMRSDMLDEIGSAKNDTAQELIRRNSRQMERLDDLDEA

Sequences:

>Translated_206_residues
MTAKGAMEGKRPRIREIVWLAGILAALVLGYALYHQLYVGASSFPFVQETILVFLGALATIFLTAMLLNRQTELELSKEA
RVHLFDQKNSVYMSAIEKVAEIAEQRDPDPALIDELRVIGHKLAVIASPEVIKSFQSVLDKLIRGLRDGNLTNADAEEVM
HAVAELTIGMRSDMLDEIGSAKNDTAQELIRRNSRQMERLDDLDEA
>Mature_205_residues
TAKGAMEGKRPRIREIVWLAGILAALVLGYALYHQLYVGASSFPFVQETILVFLGALATIFLTAMLLNRQTELELSKEAR
VHLFDQKNSVYMSAIEKVAEIAEQRDPDPALIDELRVIGHKLAVIASPEVIKSFQSVLDKLIRGLRDGNLTNADAEEVMH
AVAELTIGMRSDMLDEIGSAKNDTAQELIRRNSRQMERLDDLDEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22935; Mature: 22804

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKGAMEGKRPRIREIVWLAGILAALVLGYALYHQLYVGASSFPFVQETILVFLGALAT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IFLTAMLLNRQTELELSKEARVHLFDQKNSVYMSAIEKVAEIAEQRDPDPALIDELRVIG
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
HKLAVIASPEVIKSFQSVLDKLIRGLRDGNLTNADAEEVMHAVAELTIGMRSDMLDEIGS
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AKNDTAQELIRRNSRQMERLDDLDEA
CCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAKGAMEGKRPRIREIVWLAGILAALVLGYALYHQLYVGASSFPFVQETILVFLGALAT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IFLTAMLLNRQTELELSKEARVHLFDQKNSVYMSAIEKVAEIAEQRDPDPALIDELRVIG
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
HKLAVIASPEVIKSFQSVLDKLIRGLRDGNLTNADAEEVMHAVAELTIGMRSDMLDEIGS
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AKNDTAQELIRRNSRQMERLDDLDEA
CCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA