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The map label for this gene is fnr [C]

Identifier: 103485888

GI number: 103485888

Start: 404489

End: 405199

Strand: Direct

Name: fnr [C]

Synonym: Sala_0394

Alternate gene names: 103485888

Gene position: 404489-405199 (Clockwise)

Preceding gene: 103485887

Following gene: 103485889

Centisome position: 12.09

GC content: 56.12

Gene sequence:

>711_bases
ATGGCTGAACAGGAACCGACGCCTCGCCAAGGACTTCGAGCAGACCATCGCCCCTGCAACCGCATGGCTCTTCATCGCCT
CGATCCAGATCTTTACCCGCCGCAGCGCAAGATCATGAAATCTCAACCGATAATTTCGAATCAGACACTGAGTGGATGGG
CACTCCGGTATCGCCTGACAACCTGCGGCGAGCGACAGATTGTCGAAGTCCTGCTTCCTGGGAGCATAATCGGATTGCAA
AGCTTACTGCTCGGACTGCAAAACGAAGGCGTTTCCAGCCTGACCCGCGTTTCGCTGTGTGTTCTTGGCAGTGTCGCAGT
CGGCGAACTCTTCGCCCACCAGCCAAGTCTCGCACGAGGACTGGTCAATTCCCTTTTGCAGGATCAAAATCGCGCCGATC
GCCAGATGACGCTCGATGCGAAGACCTCCTCGGCAAGCAGCCTTGGTCATTTTTTGCTGGAAATATTTGATCGGGCTGGC
CCACTGGGTGGGCAGAACCAGCGGTGGTGTCACTTCCCTCTTCAACGCGGCGACCTCTCCGGCAATCTCGGGATTTCGCC
TACGCATGTCAGTAGGTCGACAAGTGAACTGAGCAAACTCGGCTTGGCAACAATACCGGGAAACACGCTGAAGATCATAG
ACCGGCAAGCCTTGGTGCGGTTTTCCGGCTACCAGAGAAAGCACGCGGAGGTTGAGCGACTGCTTCTGTGA

Upstream 100 bases:

>100_bases
GCCGCTTCGGCAAGTGGACCATCGAAATCATCAAGAGGTCCGATGCGGTGAAAGGCTTCGAGGTGCTCCCGCGGCGCTAG
GTGGTTGAGCGAACGCTCGC

Downstream 100 bases:

>100_bases
CTGCGAAAGCATCGGACCTCCTCATCCATCGCGAATCTGAAATCGGCGAGTCGGCTTGCTGGAGGAGAAATAATATTGCC
ATCATGCCCGCCGTCCCTAA

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAEQEPTPRQGLRADHRPCNRMALHRLDPDLYPPQRKIMKSQPIISNQTLSGWALRYRLTTCGERQIVEVLLPGSIIGLQ
SLLLGLQNEGVSSLTRVSLCVLGSVAVGELFAHQPSLARGLVNSLLQDQNRADRQMTLDAKTSSASSLGHFLLEIFDRAG
PLGGQNQRWCHFPLQRGDLSGNLGISPTHVSRSTSELSKLGLATIPGNTLKIIDRQALVRFSGYQRKHAEVERLLL

Sequences:

>Translated_236_residues
MAEQEPTPRQGLRADHRPCNRMALHRLDPDLYPPQRKIMKSQPIISNQTLSGWALRYRLTTCGERQIVEVLLPGSIIGLQ
SLLLGLQNEGVSSLTRVSLCVLGSVAVGELFAHQPSLARGLVNSLLQDQNRADRQMTLDAKTSSASSLGHFLLEIFDRAG
PLGGQNQRWCHFPLQRGDLSGNLGISPTHVSRSTSELSKLGLATIPGNTLKIIDRQALVRFSGYQRKHAEVERLLL
>Mature_235_residues
AEQEPTPRQGLRADHRPCNRMALHRLDPDLYPPQRKIMKSQPIISNQTLSGWALRYRLTTCGERQIVEVLLPGSIIGLQS
LLLGLQNEGVSSLTRVSLCVLGSVAVGELFAHQPSLARGLVNSLLQDQNRADRQMTLDAKTSSASSLGHFLLEIFDRAGP
LGGQNQRWCHFPLQRGDLSGNLGISPTHVSRSTSELSKLGLATIPGNTLKIIDRQALVRFSGYQRKHAEVERLLL

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26042; Mature: 25911

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQEPTPRQGLRADHRPCNRMALHRLDPDLYPPQRKIMKSQPIISNQTLSGWALRYRLT
CCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEC
TCGERQIVEVLLPGSIIGLQSLLLGLQNEGVSSLTRVSLCVLGSVAVGELFAHQPSLARG
CCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVNSLLQDQNRADRQMTLDAKTSSASSLGHFLLEIFDRAGPLGGQNQRWCHFPLQRGDLS
HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
GNLGISPTHVSRSTSELSKLGLATIPGNTLKIIDRQALVRFSGYQRKHAEVERLLL
CCCCCCCHHCCCCHHHHHHCCCEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
AEQEPTPRQGLRADHRPCNRMALHRLDPDLYPPQRKIMKSQPIISNQTLSGWALRYRLT
CCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEC
TCGERQIVEVLLPGSIIGLQSLLLGLQNEGVSSLTRVSLCVLGSVAVGELFAHQPSLARG
CCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LVNSLLQDQNRADRQMTLDAKTSSASSLGHFLLEIFDRAGPLGGQNQRWCHFPLQRGDLS
HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCC
GNLGISPTHVSRSTSELSKLGLATIPGNTLKIIDRQALVRFSGYQRKHAEVERLLL
CCCCCCCHHCCCCHHHHHHCCCEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA