Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485862

Identifier: 103485862

GI number: 103485862

Start: 378392

End: 379054

Strand: Direct

Name: 103485862

Synonym: Sala_0367

Alternate gene names: NA

Gene position: 378392-379054 (Clockwise)

Preceding gene: 103485861

Following gene: 103485863

Centisome position: 11.31

GC content: 66.21

Gene sequence:

>663_bases
ATGGCCAATGCCAATCCGACCCCGCTGATGCCGCATGCGACCGCCGCCTGGCTGGTCGACAACACCGGCCTGACTTTTGG
CCAGATCGCCGAATTTTGCGGCATCCACATCCTCGAGGTGCAGGCGATCGCCGACGAGACGGCGGCGACCAAATATACCG
GCCGCGACCCGGTGCGCGCGCACGAGTTGTCGATGGAGGAAATCGAAAAGGGGCAGAAGGACCCCAATTACAAGCTCAAG
ATGACCGTGCAGGCGCAGGACGTGATTCGCCGCACCCGCGGGCCGCGCTACACCCCGGTCAGCAAGCGGCAGGACAAGCC
CGACGGCATCGCATGGATCCTGAAGAACCACCCCGAAGTGTCCGACGGCGCGATCAGCAAGCTGATTGGCACGACGCGCA
ACACGATCGGCGCGATCCGCGACCGCAGCCACTGGAACAGCGCGAACATCGTCCCGAAAGACCCGGTGACGCTGGGCCTC
TGTTCGCAGCGCGAACTCGACGCGCTGGTCGCCAAGGCGGCGAAGAAGGCGGGGATCAAGGCGCCCGAGGACAGCCGGTT
GGAGGGCGACCGCGAGGCGCTGCTCGAAGAACTGCGCGCCGAACGCACCGCGGCAAACGAAGCGCGCGCGGCCGAAGAGG
CACAGGCCGACGGCGAAGACTGA

Upstream 100 bases:

>100_bases
CGGCCTGCGCTTGCGCGGAACGCTATTAAGGTCTAAACCGCCGCCGGATGGCCGCCCCGCGAGGGGCGGCCCTTATTATT
TCCGCTTTTGGAGTGCAGTC

Downstream 100 bases:

>100_bases
AGCCTGTAATGGCGGCGCTTGCCGTCATTGCGAGGAGCGAAGCGACGAAGCAATCTCCTGCAATCGCCCTTTTGCAACGA
TGGCTGGAGATTGCTTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MANANPTPLMPHATAAWLVDNTGLTFGQIAEFCGIHILEVQAIADETAATKYTGRDPVRAHELSMEEIEKGQKDPNYKLK
MTVQAQDVIRRTRGPRYTPVSKRQDKPDGIAWILKNHPEVSDGAISKLIGTTRNTIGAIRDRSHWNSANIVPKDPVTLGL
CSQRELDALVAKAAKKAGIKAPEDSRLEGDREALLEELRAERTAANEARAAEEAQADGED

Sequences:

>Translated_220_residues
MANANPTPLMPHATAAWLVDNTGLTFGQIAEFCGIHILEVQAIADETAATKYTGRDPVRAHELSMEEIEKGQKDPNYKLK
MTVQAQDVIRRTRGPRYTPVSKRQDKPDGIAWILKNHPEVSDGAISKLIGTTRNTIGAIRDRSHWNSANIVPKDPVTLGL
CSQRELDALVAKAAKKAGIKAPEDSRLEGDREALLEELRAERTAANEARAAEEAQADGED
>Mature_219_residues
ANANPTPLMPHATAAWLVDNTGLTFGQIAEFCGIHILEVQAIADETAATKYTGRDPVRAHELSMEEIEKGQKDPNYKLKM
TVQAQDVIRRTRGPRYTPVSKRQDKPDGIAWILKNHPEVSDGAISKLIGTTRNTIGAIRDRSHWNSANIVPKDPVTLGLC
SQRELDALVAKAAKKAGIKAPEDSRLEGDREALLEELRAERTAANEARAAEEAQADGED

Specific function: Unknown

COG id: COG3820

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24069; Mature: 23938

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANANPTPLMPHATAAWLVDNTGLTFGQIAEFCGIHILEVQAIADETAATKYTGRDPVRA
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCEEEEEHHHHHHHHHHCCCCCCCCCHH
HELSMEEIEKGQKDPNYKLKMTVQAQDVIRRTRGPRYTPVSKRQDKPDGIAWILKNHPEV
HHCCHHHHHCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC
SDGAISKLIGTTRNTIGAIRDRSHWNSANIVPKDPVTLGLCSQRELDALVAKAAKKAGIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCC
APEDSRLEGDREALLEELRAERTAANEARAAEEAQADGED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ANANPTPLMPHATAAWLVDNTGLTFGQIAEFCGIHILEVQAIADETAATKYTGRDPVRA
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCEEEEEHHHHHHHHHHCCCCCCCCCHH
HELSMEEIEKGQKDPNYKLKMTVQAQDVIRRTRGPRYTPVSKRQDKPDGIAWILKNHPEV
HHCCHHHHHCCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC
SDGAISKLIGTTRNTIGAIRDRSHWNSANIVPKDPVTLGLCSQRELDALVAKAAKKAGIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCC
APEDSRLEGDREALLEELRAERTAANEARAAEEAQADGED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA