Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 103485856

GI number: 103485856

Start: 373691

End: 374611

Strand: Direct

Name: ycbL [C]

Synonym: Sala_0361

Alternate gene names: 103485856

Gene position: 373691-374611 (Clockwise)

Preceding gene: 103485855

Following gene: 103485857

Centisome position: 11.17

GC content: 69.92

Gene sequence:

>921_bases
ATGAGCGACGAGAAGCCTTGGCCCGACAGCATCCGCGCCGGCGAGTGCGAGCAGCACGAACCGCTGGTGCGCCGCGTGCT
CGCGCCCAACCCGTCGCCCTATACCTTCACCGGCACGCAGACGTGGATTGTCGGTGCGGGGCGTGACGTGGCGGTGATCG
ATCCCGGTCCGACGGGCAGCGGGATGAGCGTGGGCGATCCGCCCGACGCCAACGGGCGGGGGCATGTCGAGGCGATCCTG
CGTGCCGTGGAGGGGCAGCGCGTCGCGGCGATCCTTTGCACGCACACGCACCGGGACCATTCGCCCGCCGCCGCGCCGCT
GAAAGCCGCGACGGGCGCGCCGATCATTGGCTGCGCGCCGCTCGCGCTGTCCGACGACGGGCCGCGCGCCGATTCGGCGT
TCGATCCCGATTATGCGCCCGACCGCGTGCTGATGGACGGCGAGCGGATCGCGGGTGACGGCTGGACGATCGAGGCCGTG
GCGACGCCGGGGCACACGTCGAACCATCTCTGCTTCGCGCTGGTCGAGACAGGTGCGTTGTTCACCGGCGATCATGTCAT
GGCCTGGTCGACCAGCGTGGTGAGCCCGCCCGACGGCGACATGGCGGCCTATATGGCCAGCCTGTCCAAGCTCCATGACC
GCGAGGATCGCGTCTATTATCCCGCGCACGGCCCGGCGGTGACCAAGCCGCGCCAGCTGGTGCGCGGGATGCTGGGGCAC
CGCAAGCAGCGCGAACGGCAGATCTTGCGGGAACTCGAAAGGGGCACACGCGTGATCCCCGACATGGTGAAACATATGTA
CAAGGGCCTCGACCCGCGTCTGACCGGCGCCGCCGGTCGTTCGGTGCTCGCCCATCTTCTCGACCTCGAGGCGCGCGGCC
GCGTCGCGCGTGAGGACGAGTGCTGGAGGCTGGTCGCATGA

Upstream 100 bases:

>100_bases
CAAGTGTGCGGAACGGTCGCCATCGGTCGCGAGGAGCCTTTGTGCGAAATGATCGCCCCTGCCCCTTTCGTTCCGTCCGC
CGTGATGCCACATTGAGCGC

Downstream 100 bases:

>100_bases
ACCGGGGATTGTTCCGCGTCGCGGTCGTCGCGGTGCTCGCGCTCGCACTCTTCTTCGGTTGGCGCGCGTGGAGCGACTGG
CAGCGCGGCTATGATCCCCA

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase Glyoxylase; Beta-Lactamase; Hydroxyacylglutathione Hydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase Protein; Zinc-Dependent Hydrolase; Hydrolase/Glyoxylase; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Beta-Lactamase-Like Hydrolase

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSDEKPWPDSIRAGECEQHEPLVRRVLAPNPSPYTFTGTQTWIVGAGRDVAVIDPGPTGSGMSVGDPPDANGRGHVEAIL
RAVEGQRVAAILCTHTHRDHSPAAAPLKAATGAPIIGCAPLALSDDGPRADSAFDPDYAPDRVLMDGERIAGDGWTIEAV
ATPGHTSNHLCFALVETGALFTGDHVMAWSTSVVSPPDGDMAAYMASLSKLHDREDRVYYPAHGPAVTKPRQLVRGMLGH
RKQRERQILRELERGTRVIPDMVKHMYKGLDPRLTGAAGRSVLAHLLDLEARGRVAREDECWRLVA

Sequences:

>Translated_306_residues
MSDEKPWPDSIRAGECEQHEPLVRRVLAPNPSPYTFTGTQTWIVGAGRDVAVIDPGPTGSGMSVGDPPDANGRGHVEAIL
RAVEGQRVAAILCTHTHRDHSPAAAPLKAATGAPIIGCAPLALSDDGPRADSAFDPDYAPDRVLMDGERIAGDGWTIEAV
ATPGHTSNHLCFALVETGALFTGDHVMAWSTSVVSPPDGDMAAYMASLSKLHDREDRVYYPAHGPAVTKPRQLVRGMLGH
RKQRERQILRELERGTRVIPDMVKHMYKGLDPRLTGAAGRSVLAHLLDLEARGRVAREDECWRLVA
>Mature_305_residues
SDEKPWPDSIRAGECEQHEPLVRRVLAPNPSPYTFTGTQTWIVGAGRDVAVIDPGPTGSGMSVGDPPDANGRGHVEAILR
AVEGQRVAAILCTHTHRDHSPAAAPLKAATGAPIIGCAPLALSDDGPRADSAFDPDYAPDRVLMDGERIAGDGWTIEAVA
TPGHTSNHLCFALVETGALFTGDHVMAWSTSVVSPPDGDMAAYMASLSKLHDREDRVYYPAHGPAVTKPRQLVRGMLGHR
KQRERQILRELERGTRVIPDMVKHMYKGLDPRLTGAAGRSVLAHLLDLEARGRVAREDECWRLVA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705793, Length=252, Percent_Identity=28.968253968254, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17537503, Length=246, Percent_Identity=28.8617886178862, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193205216, Length=253, Percent_Identity=28.4584980237154, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI20129357, Length=285, Percent_Identity=30.1754385964912, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33028; Mature: 32897

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEKPWPDSIRAGECEQHEPLVRRVLAPNPSPYTFTGTQTWIVGAGRDVAVIDPGPTGS
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEEEEECCCEEEEECCCCCCC
GMSVGDPPDANGRGHVEAILRAVEGQRVAAILCTHTHRDHSPAAAPLKAATGAPIIGCAP
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCEEEECC
LALSDDGPRADSAFDPDYAPDRVLMDGERIAGDGWTIEAVATPGHTSNHLCFALVETGAL
EEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCEEEEEEECCCE
FTGDHVMAWSTSVVSPPDGDMAAYMASLSKLHDREDRVYYPAHGPAVTKPRQLVRGMLGH
EECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCC
RKQRERQILRELERGTRVIPDMVKHMYKGLDPRLTGAAGRSVLAHLLDLEARGRVAREDE
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
CWRLVA
CEEECC
>Mature Secondary Structure 
SDEKPWPDSIRAGECEQHEPLVRRVLAPNPSPYTFTGTQTWIVGAGRDVAVIDPGPTGS
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCEEEEEECCCEEEEECCCCCCC
GMSVGDPPDANGRGHVEAILRAVEGQRVAAILCTHTHRDHSPAAAPLKAATGAPIIGCAP
CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHCCCCCEEEECC
LALSDDGPRADSAFDPDYAPDRVLMDGERIAGDGWTIEAVATPGHTSNHLCFALVETGAL
EEECCCCCCCCCCCCCCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCEEEEEEECCCE
FTGDHVMAWSTSVVSPPDGDMAAYMASLSKLHDREDRVYYPAHGPAVTKPRQLVRGMLGH
EECCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCC
RKQRERQILRELERGTRVIPDMVKHMYKGLDPRLTGAAGRSVLAHLLDLEARGRVAREDE
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
CWRLVA
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA