Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is ate

Identifier: 103485837

GI number: 103485837

Start: 344728

End: 345501

Strand: Direct

Name: ate

Synonym: Sala_0342

Alternate gene names: 103485837

Gene position: 344728-345501 (Clockwise)

Preceding gene: 103485836

Following gene: 103485838

Centisome position: 10.31

GC content: 65.5

Gene sequence:

>774_bases
GTGTCCGCACCGTTCCGTTTTCCGCGCTTTTTCGTCACCAGCCCGGCGCCGTGCCCCTATCTGGCGGGCAGGACCGAACG
CAAGGTTTTCACTGAGCTCAGCGGAAACAATGCAACCGAACTCAACGACGCGCTGGGCCGGATCGGCTTTCGCCGCAGCC
AGTCGGTCGCCTATCGCCCGAGCTGCGCCGATTGTTCGGCGTGCGTTTCGGTGCGCGTCTGCGCGAGCGAGTTTGCGCCG
AGCAACTCACAGAAGCGCACGCTGCGCCGCAACGGCGATCTGGTCGTCACGGCGTGCAAGCCGTGGGCCACCGAAGAGCA
ATATGCGCTGCTGCGCTCCTATCTCGCCTCGCGCCACCCCGACGGCGGCATGGCCGACATGGACGAGCAGGATTTTGCCG
ACATGGTCGAACAGACCCCGGTGGACAGCTATATGATCGAATATCGCGAGCCGGTGGCGGGCGGCGGCAAGGGGCGGCTT
GTCGGCTGTTGCCTGACCGACCGGCAGGGCGACGGGCTGTCGATGATCTACAGCTTTTTCGATGCGCATCATCCGCTGCG
CGAGGGGCTGGGCACCTACATCATCGCCGACCATGTGTTGCGCGCCGCCAAGGCGGGGCTGCCCTATGTCTACCTGGGCT
ACTGGATCGAGGGATCGGCGCGCATGGCGTACAAGGCACGCTTCCGCCCGCTCGAAAAGCTCGGCCCCGATGGCTGGTCA
CGCTTCGAGCCGACGCCGTCGGAGCGGATCGCGGCGATGTTCGAACTGGCTTGA

Upstream 100 bases:

>100_bases
GGTCTTTGCACCATTGACGCCGCGCGGCATAGTTGGTGCAAACAGCGCGCCGGGCCCGCGTCGCAGGGCTCCGCATCGCC
AGTTCGGAGGTCTATTCCGC

Downstream 100 bases:

>100_bases
ATGGTGGCGGCTTCAGGCCGCTTCCGGTCGTTAGCAGCCTCCCGATAGGCGATGCCGCTTCCTCAATAACAAAAGATTGC
GAACGTCTCGCAGCAATGCA

Product: arginyl-tRNA-protein transferase

Products: NA

Alternate protein names: Arginyltransferase; R-transferase

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSAPFRFPRFFVTSPAPCPYLAGRTERKVFTELSGNNATELNDALGRIGFRRSQSVAYRPSCADCSACVSVRVCASEFAP
SNSQKRTLRRNGDLVVTACKPWATEEQYALLRSYLASRHPDGGMADMDEQDFADMVEQTPVDSYMIEYREPVAGGGKGRL
VGCCLTDRQGDGLSMIYSFFDAHHPLREGLGTYIIADHVLRAAKAGLPYVYLGYWIEGSARMAYKARFRPLEKLGPDGWS
RFEPTPSERIAAMFELA

Sequences:

>Translated_257_residues
MSAPFRFPRFFVTSPAPCPYLAGRTERKVFTELSGNNATELNDALGRIGFRRSQSVAYRPSCADCSACVSVRVCASEFAP
SNSQKRTLRRNGDLVVTACKPWATEEQYALLRSYLASRHPDGGMADMDEQDFADMVEQTPVDSYMIEYREPVAGGGKGRL
VGCCLTDRQGDGLSMIYSFFDAHHPLREGLGTYIIADHVLRAAKAGLPYVYLGYWIEGSARMAYKARFRPLEKLGPDGWS
RFEPTPSERIAAMFELA
>Mature_256_residues
SAPFRFPRFFVTSPAPCPYLAGRTERKVFTELSGNNATELNDALGRIGFRRSQSVAYRPSCADCSACVSVRVCASEFAPS
NSQKRTLRRNGDLVVTACKPWATEEQYALLRSYLASRHPDGGMADMDEQDFADMVEQTPVDSYMIEYREPVAGGGKGRLV
GCCLTDRQGDGLSMIYSFFDAHHPLREGLGTYIIADHVLRAAKAGLPYVYLGYWIEGSARMAYKARFRPLEKLGPDGWSR
FEPTPSERIAAMFELA

Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)

COG id: COG2935

COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the R-transferase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATE_SPHAL (Q1GWA7)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615398.1
- GeneID:   4081040
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0342
- NMPDR:   fig|317655.9.peg.317
- HOGENOM:   HBG651116
- OMA:   PQFYLTA
- ProtClustDB:   PRK01305
- BioCyc:   SALA317655:SALA_0342-MONOMER
- BRENDA:   2.3.2.8
- GO:   GO:0005737
- GO:   GO:0006412
- HAMAP:   MF_00689
- InterPro:   IPR016181
- InterPro:   IPR007472
- InterPro:   IPR017138
- InterPro:   IPR007471
- PIRSF:   PIRSF037208

Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase

EC number: =2.3.2.8

Molecular weight: Translated: 28583; Mature: 28452

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPFRFPRFFVTSPAPCPYLAGRTERKVFTELSGNNATELNDALGRIGFRRSQSVAYRP
CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECC
SCADCSACVSVRVCASEFAPSNSQKRTLRRNGDLVVTACKPWATEEQYALLRSYLASRHP
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
DGGMADMDEQDFADMVEQTPVDSYMIEYREPVAGGGKGRLVGCCLTDRQGDGLSMIYSFF
CCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHH
DAHHPLREGLGTYIIADHVLRAAKAGLPYVYLGYWIEGSARMAYKARFRPLEKLGPDGWS
HHCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHCCCHHHHCCCCCC
RFEPTPSERIAAMFELA
CCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SAPFRFPRFFVTSPAPCPYLAGRTERKVFTELSGNNATELNDALGRIGFRRSQSVAYRP
CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECC
SCADCSACVSVRVCASEFAPSNSQKRTLRRNGDLVVTACKPWATEEQYALLRSYLASRHP
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
DGGMADMDEQDFADMVEQTPVDSYMIEYREPVAGGGKGRLVGCCLTDRQGDGLSMIYSFF
CCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHH
DAHHPLREGLGTYIIADHVLRAAKAGLPYVYLGYWIEGSARMAYKARFRPLEKLGPDGWS
HHCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHCCCHHHHCCCCCC
RFEPTPSERIAAMFELA
CCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA