Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485788
Identifier: 103485788
GI number: 103485788
Start: 291790
End: 292056
Strand: Direct
Name: 103485788
Synonym: Sala_0293
Alternate gene names: NA
Gene position: 291790-292056 (Clockwise)
Preceding gene: 103485787
Following gene: 103485792
Centisome position: 8.72
GC content: 64.79
Gene sequence:
>267_bases TTGCTTCATCGTCATCCCGGACTTGATCCGGGATCCATGGCGGCGCCGCAGTCATGGACCTCGGATCAGATCGGCGCTTA TCCCTTCGGGACAAGGCAAAGCTGCCTCCCGGCTTTTGCCGGGGGACAGATGTTTGATCGAGAAGCGACGCGACGCGACG CGCCGGGCGCGGCGCGCTGGACGACATCGGTGACGATGGAAAAGCATCGCTCCCTCCTCGCGCCCCGCCTCGCGACAGGT CGGCTCCGTCTCGCGCTTCAATCCTGA
Upstream 100 bases:
>100_bases CGCGACGATGCTGCAAACGGGCCGCGACATGCGCGACAAATATAAGGAAACGTCGAAGGGCGGGCTGGCGGTCAGCGTGG TGGAGTGTTGAACCCCGCCT
Downstream 100 bases:
>100_bases TGATACAGCCTGGCGCCGATGGCCTGCTTCACCGGAAGGGATCGCCGCGCGCCGTCGCATAATGCGCCATTGCCATCGTG GTCCATTGGGCGTTGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MLHRHPGLDPGSMAAPQSWTSDQIGAYPFGTRQSCLPAFAGGQMFDREATRRDAPGAARWTTSVTMEKHRSLLAPRLATG RLRLALQS
Sequences:
>Translated_88_residues MLHRHPGLDPGSMAAPQSWTSDQIGAYPFGTRQSCLPAFAGGQMFDREATRRDAPGAARWTTSVTMEKHRSLLAPRLATG RLRLALQS >Mature_88_residues MLHRHPGLDPGSMAAPQSWTSDQIGAYPFGTRQSCLPAFAGGQMFDREATRRDAPGAARWTTSVTMEKHRSLLAPRLATG RLRLALQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9621; Mature: 9621
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRHPGLDPGSMAAPQSWTSDQIGAYPFGTRQSCLPAFAGGQMFDREATRRDAPGAARW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TTSVTMEKHRSLLAPRLATGRLRLALQS EHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MLHRHPGLDPGSMAAPQSWTSDQIGAYPFGTRQSCLPAFAGGQMFDREATRRDAPGAARW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TTSVTMEKHRSLLAPRLATGRLRLALQS EHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA