Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is mshA [H]
Identifier: 103485724
GI number: 103485724
Start: 236380
End: 237585
Strand: Direct
Name: mshA [H]
Synonym: Sala_0228
Alternate gene names: 103485724
Gene position: 236380-237585 (Clockwise)
Preceding gene: 103485722
Following gene: 103485725
Centisome position: 7.07
GC content: 65.84
Gene sequence:
>1206_bases ATGACCCGCATATTGCATGTTCTTGATCATAGCCTGCCCACGCACAGCGGCTACACCTTTCGCACCCGCGCGCTGATGAA GGCGCAGGTCGCAAAGGGGTGGGAGGTCGCCGGGGTTACCGGCGTGCGGCATCCCGACGCCGGGCCGGACGGTGAAACGA TCGACGGGCTGACCTTCTATCGCACCCCGCCGATCGCGCCCGCGCGCTCGCCGCTGTACGAATGGCGTGAGATCGGCGCG CTGGCGCGGCGCGTCGAATCGCTGGCGCGCGACTGGAAACCCGATGTGCTCCACGCCCACTCGCCGGTGCTGGGCGGGCT CGCGGCGCTGCGCGTAGGCAAGCGGCTGGGCATTCCGGTGATTTATGAAATCCGGGCTTTCTGGGAGGATGCGGCGGTCG GCAACGGCACGGGGCGCGAGGGCAGTTTGCGTTACCGGCTCACCAAAATGGTCGAAACCTACGCCGTGAAATCGGCCGAC GCGGTCGCGGTGATTTGCGAGGGGTTGCGCGGCGACCTGATCGCGCGCGGGGTCGATCCGGCAAAGATCACCGTGTCGCC CAACGGCGTCGATCTGGCCCTGTTCGGCGACCCGCCGCCGCGCGACGATGCGCTCGCGTCCGAACTGGGCCTCGCTTCGG ATGATTCGGTGATCGGCTATATCGGCAGCTTTTACGATTATGAGGGGATCGACGACCTGATCGCCGCGATGCCCGCGCTC GTTGCGGCGCAGCCGAAGGCGCGGCTGCTGCTCGTTGGCGGCGGGCCGATGGAGGCGGCGCTCAAGCGCCAAGCCGCCGC GTCGCCGGCGTCGGCGCAGATTCATTTCGTCGGTCGCGTGCCGCATGGCGAAGTCGAACGCTATTATTCGCTGATCGACA TCCTCGCCTATCCACGCAAGAAGATGCGCCTGACCGATCTTGTGACGCCGCTGAAACCGCTCGAAGCGATGGCGCAGGGC AAGCTGGTCGCGGCGTCGGATGTCGGCGGGCACCGCGAACTGATCGAGGATGGCGCGACGGGCACGCTGTTCGCGCCCGA CGAGCCCGCGGCGATTGTGGACGCGCTCGACAAGCTGCTGAAAAATCGCGACATGTGGCCCCAACGGCGGCGGGCCGCAC GTATTTTTGTCGAAAGTCATCGTAACTGGTCATCAAACATTTTACGTTACGAACCGGTTTACCAGCGACTGCTGCGCGGC AGCTGA
Upstream 100 bases:
>100_bases AGTGCGTCAGGCCAATGGAAAAATTGTCGACCATAGAGGACGCCGCCTAGGCTATCGGGGTTGACGCCGCGTTAAGCCTT GTCTGTCAAAGCCCCGCACG
Downstream 100 bases:
>100_bases CGCCGTCGGCACGACGCGATGCGGGCCCGGCGGGCCATGGATTTGGGAAGATATGGACGAGACGAGCGACAAGCGGGTGA AGATCAGGGCGGGCGCGCTG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTRILHVLDHSLPTHSGYTFRTRALMKAQVAKGWEVAGVTGVRHPDAGPDGETIDGLTFYRTPPIAPARSPLYEWREIGA LARRVESLARDWKPDVLHAHSPVLGGLAALRVGKRLGIPVIYEIRAFWEDAAVGNGTGREGSLRYRLTKMVETYAVKSAD AVAVICEGLRGDLIARGVDPAKITVSPNGVDLALFGDPPPRDDALASELGLASDDSVIGYIGSFYDYEGIDDLIAAMPAL VAAQPKARLLLVGGGPMEAALKRQAAASPASAQIHFVGRVPHGEVERYYSLIDILAYPRKKMRLTDLVTPLKPLEAMAQG KLVAASDVGGHRELIEDGATGTLFAPDEPAAIVDALDKLLKNRDMWPQRRRAARIFVESHRNWSSNILRYEPVYQRLLRG S
Sequences:
>Translated_401_residues MTRILHVLDHSLPTHSGYTFRTRALMKAQVAKGWEVAGVTGVRHPDAGPDGETIDGLTFYRTPPIAPARSPLYEWREIGA LARRVESLARDWKPDVLHAHSPVLGGLAALRVGKRLGIPVIYEIRAFWEDAAVGNGTGREGSLRYRLTKMVETYAVKSAD AVAVICEGLRGDLIARGVDPAKITVSPNGVDLALFGDPPPRDDALASELGLASDDSVIGYIGSFYDYEGIDDLIAAMPAL VAAQPKARLLLVGGGPMEAALKRQAAASPASAQIHFVGRVPHGEVERYYSLIDILAYPRKKMRLTDLVTPLKPLEAMAQG KLVAASDVGGHRELIEDGATGTLFAPDEPAAIVDALDKLLKNRDMWPQRRRAARIFVESHRNWSSNILRYEPVYQRLLRG S >Mature_400_residues TRILHVLDHSLPTHSGYTFRTRALMKAQVAKGWEVAGVTGVRHPDAGPDGETIDGLTFYRTPPIAPARSPLYEWREIGAL ARRVESLARDWKPDVLHAHSPVLGGLAALRVGKRLGIPVIYEIRAFWEDAAVGNGTGREGSLRYRLTKMVETYAVKSADA VAVICEGLRGDLIARGVDPAKITVSPNGVDLALFGDPPPRDDALASELGLASDDSVIGYIGSFYDYEGIDDLIAAMPALV AAQPKARLLLVGGGPMEAALKRQAAASPASAQIHFVGRVPHGEVERYYSLIDILAYPRKKMRLTDLVTPLKPLEAMAQGK LVAASDVGGHRELIEDGATGTLFAPDEPAAIVDALDKLLKNRDMWPQRRRAARIFVESHRNWSSNILRYEPVYQRLLRGS
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Caenorhabditis elegans, GI17532709, Length=308, Percent_Identity=24.025974025974, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 43674; Mature: 43542
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILHVLDHSLPTHSGYTFRTRALMKAQVAKGWEVAGVTGVRHPDAGPDGETIDGLTFY CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEE RTPPIAPARSPLYEWREIGALARRVESLARDWKPDVLHAHSPVLGGLAALRVGKRLGIPV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHCCCCC IYEIRAFWEDAAVGNGTGREGSLRYRLTKMVETYAVKSADAVAVICEGLRGDLIARGVDP EEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCC AKITVSPNGVDLALFGDPPPRDDALASELGLASDDSVIGYIGSFYDYEGIDDLIAAMPAL CEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH VAAQPKARLLLVGGGPMEAALKRQAAASPASAQIHFVGRVPHGEVERYYSLIDILAYPRK HHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHH KMRLTDLVTPLKPLEAMAQGKLVAASDVGGHRELIEDGATGTLFAPDEPAAIVDALDKLL HHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHH KNRDMWPQRRRAARIFVESHRNWSSNILRYEPVYQRLLRGS HCCCCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHCCC >Mature Secondary Structure TRILHVLDHSLPTHSGYTFRTRALMKAQVAKGWEVAGVTGVRHPDAGPDGETIDGLTFY CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEE RTPPIAPARSPLYEWREIGALARRVESLARDWKPDVLHAHSPVLGGLAALRVGKRLGIPV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHCCCCC IYEIRAFWEDAAVGNGTGREGSLRYRLTKMVETYAVKSADAVAVICEGLRGDLIARGVDP EEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCC AKITVSPNGVDLALFGDPPPRDDALASELGLASDDSVIGYIGSFYDYEGIDDLIAAMPAL CEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHH VAAQPKARLLLVGGGPMEAALKRQAAASPASAQIHFVGRVPHGEVERYYSLIDILAYPRK HHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHH KMRLTDLVTPLKPLEAMAQGKLVAASDVGGHRELIEDGATGTLFAPDEPAAIVDALDKLL HHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHH KNRDMWPQRRRAARIFVESHRNWSSNILRYEPVYQRLLRGS HCCCCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA