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The map label for this gene is yagA [C]

Identifier: 103485720

GI number: 103485720

Start: 232707

End: 233657

Strand: Direct

Name: yagA [C]

Synonym: Sala_0224

Alternate gene names: 103485720

Gene position: 232707-233657 (Clockwise)

Preceding gene: 103485719

Following gene: 103485722

Centisome position: 6.96

GC content: 59.31

Gene sequence:

>951_bases
ATGGGACAGATTTTACACGGGAGCGCCAAGACCACGCACGCCATTCGAGGCGAGCTACAGCGATCGCAAGCTTCGGTCGC
GAGCCTCGCGAGGAAGTACGGGATCAACGAGAAGACCGTCTTGAAGTGGCGCCATCGGCAGTCTGTGGACGACATGCCGA
TGGGGCCGAAGGAGCGCCGCAGCACCGTCCTCTCGCCTATGGAAGAAGCTGCCATCGTGGCGTTGCGGGTTCAGGCGCGG
TTGCCGCTCGACGACGTCTACATCGCGCTAAAGGACGTGATCCCGCAGTTGACGCGCTCGTCGCTGCATCGCTGCCTGCA
ACGGCATGGCATCAGCCGCCTGCCCAAAGCGGACCGCGAGAAGCCGAAGAAGTTCAAGGATTATGAGATCGGCTACTTCC
ACATCGACATCGCCGAGCTACGCTATGAGGGCGGCAAGGCCTTCCTCTATGTGGCGGTGGACCGCACCTCGAAGCTGGTC
TTCGCCCGCATCTATCGCAAGGCCACAAAGCTTGCCGCCGCAGCTTTCCTCAAGGTGCTGGTCAAGACCGTGCCTTACAG
GATCCACACCGTGCTGACCGACAATGGCGTCCAGTTCGTCCAGCCCCAGCGCGGCCAGAGCCGGCAATGGCTGATCCACA
TCTTCGAGCGGGTCTGCCTCGAAAACGGCATCGAGCATCGGCTGACCAAGCCCTACCACCCATGGACCAATGGTCAAGCC
GAGCGGATGGTCCGAACCATCAAGGAAGCGACCGTCAAATCCTTCCATTATGCCTCGATCCAGGAACTGCGACGACACGT
CAGCGACTGGCTGATCGCCTACAACTTCGCCAAGCAGCTCAAGGCTCTCAAGTTCAGGACACCATATGAAGCCATCGAGG
AACTCTGGAAATCAAAGCCCGATGTCTTTATCGTCAAACCCAACCATCACATGCTGGGACCAAACAACTAG

Upstream 100 bases:

>100_bases
GATGGCGCATATGGAAAAGCGCAGGCCCAATTTTGTCGACTAGCTGTTTGGTCCCAGCATGTGATGGTGTAGACTTGTCG
CCGTTGCAGCGGAGGGAGCT

Downstream 100 bases:

>100_bases
GCTGTAGTGACAATTTAATCATTTGAGCCACAACATTATGCTTGCGAGTTTGATGAAGCCAAGGAAGTTTGCGGCGAGTT
TGTCATGGCGGGTGGCGATG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Integrase Catalytic Core; Fis Family Transcriptional Regulator; Transposase And Inactivated Derivatives; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; Hypothethical Protein Transposase; Instegrase; Transposase Of

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MGQILHGSAKTTHAIRGELQRSQASVASLARKYGINEKTVLKWRHRQSVDDMPMGPKERRSTVLSPMEEAAIVALRVQAR
LPLDDVYIALKDVIPQLTRSSLHRCLQRHGISRLPKADREKPKKFKDYEIGYFHIDIAELRYEGGKAFLYVAVDRTSKLV
FARIYRKATKLAAAAFLKVLVKTVPYRIHTVLTDNGVQFVQPQRGQSRQWLIHIFERVCLENGIEHRLTKPYHPWTNGQA
ERMVRTIKEATVKSFHYASIQELRRHVSDWLIAYNFAKQLKALKFRTPYEAIEELWKSKPDVFIVKPNHHMLGPNN

Sequences:

>Translated_316_residues
MGQILHGSAKTTHAIRGELQRSQASVASLARKYGINEKTVLKWRHRQSVDDMPMGPKERRSTVLSPMEEAAIVALRVQAR
LPLDDVYIALKDVIPQLTRSSLHRCLQRHGISRLPKADREKPKKFKDYEIGYFHIDIAELRYEGGKAFLYVAVDRTSKLV
FARIYRKATKLAAAAFLKVLVKTVPYRIHTVLTDNGVQFVQPQRGQSRQWLIHIFERVCLENGIEHRLTKPYHPWTNGQA
ERMVRTIKEATVKSFHYASIQELRRHVSDWLIAYNFAKQLKALKFRTPYEAIEELWKSKPDVFIVKPNHHMLGPNN
>Mature_315_residues
GQILHGSAKTTHAIRGELQRSQASVASLARKYGINEKTVLKWRHRQSVDDMPMGPKERRSTVLSPMEEAAIVALRVQARL
PLDDVYIALKDVIPQLTRSSLHRCLQRHGISRLPKADREKPKKFKDYEIGYFHIDIAELRYEGGKAFLYVAVDRTSKLVF
ARIYRKATKLAAAAFLKVLVKTVPYRIHTVLTDNGVQFVQPQRGQSRQWLIHIFERVCLENGIEHRLTKPYHPWTNGQAE
RMVRTIKEATVKSFHYASIQELRRHVSDWLIAYNFAKQLKALKFRTPYEAIEELWKSKPDVFIVKPNHHMLGPNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36595; Mature: 36464

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQILHGSAKTTHAIRGELQRSQASVASLARKYGINEKTVLKWRHRQSVDDMPMGPKERR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH
STVLSPMEEAAIVALRVQARLPLDDVYIALKDVIPQLTRSSLHRCLQRHGISRLPKADRE
HHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
KPKKFKDYEIGYFHIDIAELRYEGGKAFLYVAVDRTSKLVFARIYRKATKLAAAAFLKVL
CCCCCCCCCCEEEEEEHHHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VKTVPYRIHTVLTDNGVQFVQPQRGQSRQWLIHIFERVCLENGIEHRLTKPYHPWTNGQA
HHHCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHH
ERMVRTIKEATVKSFHYASIQELRRHVSDWLIAYNFAKQLKALKFRTPYEAIEELWKSKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
DVFIVKPNHHMLGPNN
CEEEECCCCCCCCCCC
>Mature Secondary Structure 
GQILHGSAKTTHAIRGELQRSQASVASLARKYGINEKTVLKWRHRQSVDDMPMGPKERR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHH
STVLSPMEEAAIVALRVQARLPLDDVYIALKDVIPQLTRSSLHRCLQRHGISRLPKADRE
HHHHCCHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
KPKKFKDYEIGYFHIDIAELRYEGGKAFLYVAVDRTSKLVFARIYRKATKLAAAAFLKVL
CCCCCCCCCCEEEEEEHHHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
VKTVPYRIHTVLTDNGVQFVQPQRGQSRQWLIHIFERVCLENGIEHRLTKPYHPWTNGQA
HHHCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHH
ERMVRTIKEATVKSFHYASIQELRRHVSDWLIAYNFAKQLKALKFRTPYEAIEELWKSKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
DVFIVKPNHHMLGPNN
CEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA