Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109157

Identifier: 222109157

GI number: 222109157

Start: 46925

End: 47209

Strand: Reverse

Name: 222109157

Synonym: Avi_9551

Alternate gene names: NA

Gene position: 47209-46925 (Counterclockwise)

Preceding gene: 222109162

Following gene: 222109156

Centisome position: 36.19

GC content: 62.11

Gene sequence:

>285_bases
ATGCTCCTGTTCGGTGCGGACACGGCCCTTTGCCGGTCCTTCTCGCGTCTTCTTTTTTCCCGAAGACATCTCCCGAACCG
CGGAGCGGTCGGTCCGGTGCAACGGCGGCCGAGCATCCCTGCCGCGAAGGACGAGCGGGGCTCACAGCCCTGCGAAGCAC
GAGTGGCCGGGATCGCGCAGGCGGCGGTTGAGCGAGAGCGCCACCGGATCGATCGATCTGCGAGGAGGCTTTTTCTTTTT
TCCTTCTCTTCTCCAACTCCGGCATTTTTAGGCCGCTTGTTTTGA

Upstream 100 bases:

>100_bases
CCAGCATCAGGGCGTCGGATTGCGGCGATGATTGCGACCGGCGTGTCCTGTCCGGATTGTCCTTCAATGCGCGCGGATCG
AGTCTGACGATATGCATGGG

Downstream 100 bases:

>100_bases
CGCTATTTTACGTCTATATAAATGGCAGATACTGGAAAGGAGCCTCTTATGGGTCTCGCTCAATATGCCGATGGGGGCTT
TTTCGCACCTCGCAAGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MLLFGADTALCRSFSRLLFSRRHLPNRGAVGPVQRRPSIPAAKDERGSQPCEARVAGIAQAAVERERHRIDRSARRLFLF
SFSSPTPAFLGRLF

Sequences:

>Translated_94_residues
MLLFGADTALCRSFSRLLFSRRHLPNRGAVGPVQRRPSIPAAKDERGSQPCEARVAGIAQAAVERERHRIDRSARRLFLF
SFSSPTPAFLGRLF
>Mature_94_residues
MLLFGADTALCRSFSRLLFSRRHLPNRGAVGPVQRRPSIPAAKDERGSQPCEARVAGIAQAAVERERHRIDRSARRLFLF
SFSSPTPAFLGRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10523; Mature: 10523

Theoretical pI: Translated: 12.28; Mature: 12.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLFGADTALCRSFSRLLFSRRHLPNRGAVGPVQRRPSIPAAKDERGSQPCEARVAGIAQ
CEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAVERERHRIDRSARRLFLFSFSSPTPAFLGRLF
HHHHHHHHHHHHHHHEEEEEECCCCCHHHHHCCC
>Mature Secondary Structure
MLLFGADTALCRSFSRLLFSRRHLPNRGAVGPVQRRPSIPAAKDERGSQPCEARVAGIAQ
CEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AAVERERHRIDRSARRLFLFSFSSPTPAFLGRLF
HHHHHHHHHHHHHHHEEEEEECCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA