Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109156

Identifier: 222109156

GI number: 222109156

Start: 46526

End: 46876

Strand: Reverse

Name: 222109156

Synonym: Avi_9550

Alternate gene names: NA

Gene position: 46876-46526 (Counterclockwise)

Preceding gene: 222109157

Following gene: 222109155

Centisome position: 35.94

GC content: 58.4

Gene sequence:

>351_bases
ATGGGTCTCGCTCAATATGCCGATGGGGGCTTTTTCGCACCTCGCAAGATTGCCGAAGCGTTCCTCACGACCAGTGAAGA
AGTTGCAAGGACAGCAGGCCTCGGAAAGGATTCCGTGCAGCGTAAGGAACGTGTTCGCTCGGACAGAACCCAACGCCGCC
TGCGCGAAATGATCGAGGTCATCAACAAGGTGGAGCCACGGTTCGGTTCCGCTTTGATAGCTTATGCCTGGTTCAGGTCA
GAACCCCTGCCCGGCTTCTCCGGGCAAACGGCTATGCAACTCGTTCGCACCGGCCGGGTCGAGGATGTCCTCGACTTTAT
CGATGCGGTCGACGCTGGCGTCCATGCCTGA

Upstream 100 bases:

>100_bases
TCTTTTTTCCTTCTCTTCTCCAACTCCGGCATTTTTAGGCCGCTTGTTTTGACGCTATTTTACGTCTATATAAATGGCAG
ATACTGGAAAGGAGCCTCTT

Downstream 100 bases:

>100_bases
CCGAGATGGAGTATCTTGGTCCGCTTTATCGCGCGCTCAACCCCGTATACGCGCGTGAACCACTATCCGGTCGTGGTGCC
GAACTCTATGGCGGCCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MGLAQYADGGFFAPRKIAEAFLTTSEEVARTAGLGKDSVQRKERVRSDRTQRRLREMIEVINKVEPRFGSALIAYAWFRS
EPLPGFSGQTAMQLVRTGRVEDVLDFIDAVDAGVHA

Sequences:

>Translated_116_residues
MGLAQYADGGFFAPRKIAEAFLTTSEEVARTAGLGKDSVQRKERVRSDRTQRRLREMIEVINKVEPRFGSALIAYAWFRS
EPLPGFSGQTAMQLVRTGRVEDVLDFIDAVDAGVHA
>Mature_115_residues
GLAQYADGGFFAPRKIAEAFLTTSEEVARTAGLGKDSVQRKERVRSDRTQRRLREMIEVINKVEPRFGSALIAYAWFRSE
PLPGFSGQTAMQLVRTGRVEDVLDFIDAVDAGVHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12903; Mature: 12772

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAQYADGGFFAPRKIAEAFLTTSEEVARTAGLGKDSVQRKERVRSDRTQRRLREMIEV
CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
INKVEPRFGSALIAYAWFRSEPLPGFSGQTAMQLVRTGRVEDVLDFIDAVDAGVHA
HHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLAQYADGGFFAPRKIAEAFLTTSEEVARTAGLGKDSVQRKERVRSDRTQRRLREMIEV
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
INKVEPRFGSALIAYAWFRSEPLPGFSGQTAMQLVRTGRVEDVLDFIDAVDAGVHA
HHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA