Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109140

Identifier: 222109140

GI number: 222109140

Start: 25510

End: 26523

Strand: Direct

Name: 222109140

Synonym: Avi_9528

Alternate gene names: NA

Gene position: 25510-26523 (Clockwise)

Preceding gene: 222109137

Following gene: 222109141

Centisome position: 19.56

GC content: 52.17

Gene sequence:

>1014_bases
ATGATCCGTTTGTCCGGTCACAGCTTGGAAAGCATGGGCTTCAGCAAGCTCGATAAAGGCGATCGCTTGTATGGTCGCTT
TTGCCGGTTGCTCATCTATCATATTGAGGGCTTCAGGATAGACCAGCCGGTCATCGGTCCTTTGAGCTATATCTTTGAAG
GTCATTCCTGCATCCTCGCCATTGGTGGCAGCGTGAACCAGGCCTGCAAAGTTCTTGTCGATGACGAGCTCGTCGAAGAT
GAGGATGAATGGCGCAAGAAGAACGGCACGATCGGTCCTTATTTGGTTCTGAAAATTGGGCCATCCAAAGAATATGCGAC
GACCGCTACGCATTCGCGCAAAGATGGAAATGGAATCTGGACCAATGGCGGCTTCGAGGAAGCAAGGGTAGAGCTGGATG
GAATACAAGATAGCGTTGCGCCGCGGGTTGTCTCGAGCTTGACGGTTGCTTTTTCAAGTGCGGAAACAGCTTTTCGCGCA
GTTGAAGCGGCGAACTTTGGCCTCGCAAGGAGTGGCGAGCGGCTGCGCGACATGAGCTTCTCGATGAGCGCTTATGCCAT
TGTTTCCAAACCGATCGCGGCCGATGAGGTCAAAGCTACAGTGCTCGACGCCTTGAGGCATTCTTTCTGCCTAGACAGGA
AGGTCGCTGGTTTTTATGATCTGGCACTGAAGGAGACTGACCCAACCAAGCAATTTTTGCTCTTTTTCATCGCGCTGGAA
TTGCTGACGAAAACGGAGTTTGCCACGCGATACCCGTCGGTCGCTAACTCAGTATCCGCCGCGACGATTCCCGCGAATGA
CAGAAAAAAGCTTGAGCACCAATTCTCCTGGCTACAAAAGAATGTCTTAACTTCGCTACCCCAGCAGTGCGTGGACAGCT
TCCAACGACTGAGAAAGTTGCGAAATCTGATAACTCACGGCGGCATTGCGTCGCCCGAGCCGCAAAGCCTCGGGGAAGTC
AAGCTATTGGCAACAACGATACTCTCTTCGGTAATGACTTTGCCGGAACGATAG

Upstream 100 bases:

>100_bases
CCCCTGCGGAATGTTTTTCAACAGCTTACCAATACAGAAGTTATTCCAAAATGGTAATCGTAGAGACCGGAACTTTAGTT
AGCATTTCGAAAGAATCAAA

Downstream 100 bases:

>100_bases
GGGAAGTTTGTTCAGGGAGACAATGAATTTCATACTGGGGCAACGACATTGACGAAACTTCTACAGAAATCCACGAAACC
CAAATTGACGAATATAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIRLSGHSLESMGFSKLDKGDRLYGRFCRLLIYHIEGFRIDQPVIGPLSYIFEGHSCILAIGGSVNQACKVLVDDELVED
EDEWRKKNGTIGPYLVLKIGPSKEYATTATHSRKDGNGIWTNGGFEEARVELDGIQDSVAPRVVSSLTVAFSSAETAFRA
VEAANFGLARSGERLRDMSFSMSAYAIVSKPIAADEVKATVLDALRHSFCLDRKVAGFYDLALKETDPTKQFLLFFIALE
LLTKTEFATRYPSVANSVSAATIPANDRKKLEHQFSWLQKNVLTSLPQQCVDSFQRLRKLRNLITHGGIASPEPQSLGEV
KLLATTILSSVMTLPER

Sequences:

>Translated_337_residues
MIRLSGHSLESMGFSKLDKGDRLYGRFCRLLIYHIEGFRIDQPVIGPLSYIFEGHSCILAIGGSVNQACKVLVDDELVED
EDEWRKKNGTIGPYLVLKIGPSKEYATTATHSRKDGNGIWTNGGFEEARVELDGIQDSVAPRVVSSLTVAFSSAETAFRA
VEAANFGLARSGERLRDMSFSMSAYAIVSKPIAADEVKATVLDALRHSFCLDRKVAGFYDLALKETDPTKQFLLFFIALE
LLTKTEFATRYPSVANSVSAATIPANDRKKLEHQFSWLQKNVLTSLPQQCVDSFQRLRKLRNLITHGGIASPEPQSLGEV
KLLATTILSSVMTLPER
>Mature_337_residues
MIRLSGHSLESMGFSKLDKGDRLYGRFCRLLIYHIEGFRIDQPVIGPLSYIFEGHSCILAIGGSVNQACKVLVDDELVED
EDEWRKKNGTIGPYLVLKIGPSKEYATTATHSRKDGNGIWTNGGFEEARVELDGIQDSVAPRVVSSLTVAFSSAETAFRA
VEAANFGLARSGERLRDMSFSMSAYAIVSKPIAADEVKATVLDALRHSFCLDRKVAGFYDLALKETDPTKQFLLFFIALE
LLTKTEFATRYPSVANSVSAATIPANDRKKLEHQFSWLQKNVLTSLPQQCVDSFQRLRKLRNLITHGGIASPEPQSLGEV
KLLATTILSSVMTLPER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37252; Mature: 37252

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLSGHSLESMGFSKLDKGDRLYGRFCRLLIYHIEGFRIDQPVIGPLSYIFEGHSCILA
CEEECCCCHHHCCCHHCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCEEEEE
IGGSVNQACKVLVDDELVEDEDEWRKKNGTIGPYLVLKIGPSKEYATTATHSRKDGNGIW
ECCCHHHHHHHHCCHHHHCCHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCC
TNGGFEEARVELDGIQDSVAPRVVSSLTVAFSSAETAFRAVEAANFGLARSGERLRDMSF
CCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SMSAYAIVSKPIAADEVKATVLDALRHSFCLDRKVAGFYDLALKETDPTKQFLLFFIALE
CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHHH
LLTKTEFATRYPSVANSVSAATIPANDRKKLEHQFSWLQKNVLTSLPQQCVDSFQRLRKL
HHHHHHHHHHCCHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLITHGGIASPEPQSLGEVKLLATTILSSVMTLPER
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRLSGHSLESMGFSKLDKGDRLYGRFCRLLIYHIEGFRIDQPVIGPLSYIFEGHSCILA
CEEECCCCHHHCCCHHCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCEEEEE
IGGSVNQACKVLVDDELVEDEDEWRKKNGTIGPYLVLKIGPSKEYATTATHSRKDGNGIW
ECCCHHHHHHHHCCHHHHCCHHHHHHCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCC
TNGGFEEARVELDGIQDSVAPRVVSSLTVAFSSAETAFRAVEAANFGLARSGERLRDMSF
CCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SMSAYAIVSKPIAADEVKATVLDALRHSFCLDRKVAGFYDLALKETDPTKQFLLFFIALE
CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHHH
LLTKTEFATRYPSVANSVSAATIPANDRKKLEHQFSWLQKNVLTSLPQQCVDSFQRLRKL
HHHHHHHHHHCCHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNLITHGGIASPEPQSLGEVKLLATTILSSVMTLPER
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA