Click here to switch to the map view.

The map label for this gene is 222109139

Identifier: 222109139

GI number: 222109139

Start: 24544

End: 25332

Strand: Reverse

Name: 222109139

Synonym: Avi_9527

Alternate gene names: NA

Gene position: 25332-24544 (Counterclockwise)

Preceding gene: 222109142

Following gene: 222109138

Centisome position: 19.42

GC content: 55.64

Gene sequence:

>789_bases
ATGGTCAGCTTGTTCCACGAATTGAACATCGACTTCAGACAGCCGGGTTTTTACGACCAGCCCAATTTTGTCGCACAGGA
GCAGAAAGACAAGCGGTTTGCCGAAAACTATGCCGAGTGGGTGTTGCTGCGTGAACGAAATCAAGATTACGACGCACGCG
CCCAGGCTATTGTTCCCCAGGTGGCTGCAATCCTGCAGCGACGGATAGTCCAGCACAACTGGCACGGCGCTTGTATCGCG
ATGACCGCGATACTGACACGCATCCTGGACCGGCTGGGCATCTGGAATATTCCCGTCCGTGGTTCCGCATCGGTTTATGC
CGAGGGCTCCTCACGCCATTTCGCGATCATCGATCAAAACGAAGGAACCGGTTTCGATACAGGTCACATGTGGGTGATCG
CCCCCCCATACGACATCATCGACGTAACCTTGCACTATCAACGTTGGCAGGGGGATGCGTTCCAACGCCATGTACCCGTA
ATCATCCTCGGCAAAGGTCTCGCAAGTGTTAAGGCGCGTGCGCAGGACGTTATCGCTCCGGAACTTCGGTCGCAAATGCC
CCGCGACCCAGATATCCATTACAAGGTTTTTCCAGACCAACGGCGGGTTCTCGAAAAATTTCCGGCAAAGCGGTTTATCA
GCGGCTCGACCGATATCCGCTACGTGCCCGGAGGCGTCAGCCTACCGGACTTGCCACTGGAAGGGATCAACGAAGAGGCG
AGAGCCGGTGTGCCGGGAATTCAAATATGGACGGACGATATCTTGCCAACGTTAGGCACCACGGCCTGA

Upstream 100 bases:

>100_bases
TGTTGAAAAACATTCCGCAGGGGGAATTGTGGGCGAGGCAAAAAGAAAAAAGCTACTGGAACAACCTTCGCCGGAGTCGC
TGAATGCTCGCCGTATGGAG

Downstream 100 bases:

>100_bases
TATTGATGTCCGACTAGGCTTCGTCATCCTGAAAGGCCAAGATAGGCTCGTCAAGGATGCCAAACCAGCGTTTGGCTCAG
AGGCGGCTGCTGTTGGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVSLFHELNIDFRQPGFYDQPNFVAQEQKDKRFAENYAEWVLLRERNQDYDARAQAIVPQVAAILQRRIVQHNWHGACIA
MTAILTRILDRLGIWNIPVRGSASVYAEGSSRHFAIIDQNEGTGFDTGHMWVIAPPYDIIDVTLHYQRWQGDAFQRHVPV
IILGKGLASVKARAQDVIAPELRSQMPRDPDIHYKVFPDQRRVLEKFPAKRFISGSTDIRYVPGGVSLPDLPLEGINEEA
RAGVPGIQIWTDDILPTLGTTA

Sequences:

>Translated_262_residues
MVSLFHELNIDFRQPGFYDQPNFVAQEQKDKRFAENYAEWVLLRERNQDYDARAQAIVPQVAAILQRRIVQHNWHGACIA
MTAILTRILDRLGIWNIPVRGSASVYAEGSSRHFAIIDQNEGTGFDTGHMWVIAPPYDIIDVTLHYQRWQGDAFQRHVPV
IILGKGLASVKARAQDVIAPELRSQMPRDPDIHYKVFPDQRRVLEKFPAKRFISGSTDIRYVPGGVSLPDLPLEGINEEA
RAGVPGIQIWTDDILPTLGTTA
>Mature_262_residues
MVSLFHELNIDFRQPGFYDQPNFVAQEQKDKRFAENYAEWVLLRERNQDYDARAQAIVPQVAAILQRRIVQHNWHGACIA
MTAILTRILDRLGIWNIPVRGSASVYAEGSSRHFAIIDQNEGTGFDTGHMWVIAPPYDIIDVTLHYQRWQGDAFQRHVPV
IILGKGLASVKARAQDVIAPELRSQMPRDPDIHYKVFPDQRRVLEKFPAKRFISGSTDIRYVPGGVSLPDLPLEGINEEA
RAGVPGIQIWTDDILPTLGTTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29691; Mature: 29691

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLFHELNIDFRQPGFYDQPNFVAQEQKDKRFAENYAEWVLLRERNQDYDARAQAIVPQ
CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH
VAAILQRRIVQHNWHGACIAMTAILTRILDRLGIWNIPVRGSASVYAEGSSRHFAIIDQN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECC
EGTGFDTGHMWVIAPPYDIIDVTLHYQRWQGDAFQRHVPVIILGKGLASVKARAQDVIAP
CCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHCCCCEEEECCCHHHHHHHHHHHHHH
ELRSQMPRDPDIHYKVFPDQRRVLEKFPAKRFISGSTDIRYVPGGVSLPDLPLEGINEEA
HHHHHCCCCCCCEEEECCHHHHHHHHCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHH
RAGVPGIQIWTDDILPTLGTTA
HCCCCCEEEEHHHHHCCCCCCC
>Mature Secondary Structure
MVSLFHELNIDFRQPGFYDQPNFVAQEQKDKRFAENYAEWVLLRERNQDYDARAQAIVPQ
CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH
VAAILQRRIVQHNWHGACIAMTAILTRILDRLGIWNIPVRGSASVYAEGSSRHFAIIDQN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECC
EGTGFDTGHMWVIAPPYDIIDVTLHYQRWQGDAFQRHVPVIILGKGLASVKARAQDVIAP
CCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHCCCCEEEECCCHHHHHHHHHHHHHH
ELRSQMPRDPDIHYKVFPDQRRVLEKFPAKRFISGSTDIRYVPGGVSLPDLPLEGINEEA
HHHHHCCCCCCCEEEECCHHHHHHHHCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHH
RAGVPGIQIWTDDILPTLGTTA
HCCCCCEEEEHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA