Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109132

Identifier: 222109132

GI number: 222109132

Start: 16434

End: 16715

Strand: Reverse

Name: 222109132

Synonym: Avi_9519

Alternate gene names: NA

Gene position: 16715-16434 (Counterclockwise)

Preceding gene: 222109138

Following gene: 222109130

Centisome position: 12.81

GC content: 51.42

Gene sequence:

>282_bases
ATGCATCAAGGTTTCAGCTTGTTGAAATGCGAGAAGCCCGACCCGCCGATCAACGTTCATTGTGAACATATCATTGTCAT
GCAGTATTTTTTGTATGGCTTTATCTGCTGCCGATACTTCGCCGCGTGCCTCCTTTTGCCGAAACTCACGGTCCAATTCA
TGTCTGTTGCCCCACAAGGCCATCTGGCCCATCGATTGAGCAAATTGCCGAAGCTGAGCTGGACTTCGTGCAAACATCGT
GGCGAGAAACGCTGCGAAGTCGAGCTTCGCCACAGGCGCTAG

Upstream 100 bases:

>100_bases
CCGAGGCTCCCCCGCCCTTGACCCAAAACACCGGATTATCGCTTGTGATCAGTTGTTGGTTATCGCTGATCTCATAGCTC
CATTTCATCCGCGCCATGAG

Downstream 100 bases:

>100_bases
AGGCTTAAAGGCTAGCAGATCAGGATAGATAATGCTGCTTGCGACTCGATCTTCGCAAGCGTGTCCTCGATCAAGTCGAT
CCGAGCGCCATCCTCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MHQGFSLLKCEKPDPPINVHCEHIIVMQYFLYGFICCRYFAACLLLPKLTVQFMSVAPQGHLAHRLSKLPKLSWTSCKHR
GEKRCEVELRHRR

Sequences:

>Translated_93_residues
MHQGFSLLKCEKPDPPINVHCEHIIVMQYFLYGFICCRYFAACLLLPKLTVQFMSVAPQGHLAHRLSKLPKLSWTSCKHR
GEKRCEVELRHRR
>Mature_93_residues
MHQGFSLLKCEKPDPPINVHCEHIIVMQYFLYGFICCRYFAACLLLPKLTVQFMSVAPQGHLAHRLSKLPKLSWTSCKHR
GEKRCEVELRHRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10922; Mature: 10922

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
7.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQGFSLLKCEKPDPPINVHCEHIIVMQYFLYGFICCRYFAACLLLPKLTVQFMSVAPQG
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HLAHRLSKLPKLSWTSCKHRGEKRCEVELRHRR
HHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCC
>Mature Secondary Structure
MHQGFSLLKCEKPDPPINVHCEHIIVMQYFLYGFICCRYFAACLLLPKLTVQFMSVAPQG
CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HLAHRLSKLPKLSWTSCKHRGEKRCEVELRHRR
HHHHHHHHCCCCCCHHHHHCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA