Click here to switch to the map view.

The map label for this gene is 222109129

Identifier: 222109129

GI number: 222109129

Start: 10397

End: 10969

Strand: Reverse

Name: 222109129

Synonym: Avi_9514

Alternate gene names: NA

Gene position: 10969-10397 (Counterclockwise)

Preceding gene: 222109130

Following gene: 222109127

Centisome position: 8.41

GC content: 43.8

Gene sequence:

>573_bases
ATGCAAGAAGACATTGCAGTAAAATTCGATCAGCAGCTAGCGTACCTGGAACAGGATATCAGGTACTACAGGAAGAGAAG
CAATTTCTTTGATTTTCTTCATACTGTGACTATGATCGTGGTCTTACTTTCTAGCTTTGCGGCTACCATCTCGTTTGTGG
GAGAAATCTTCAGCGACAACTACATAAAGTTGATGCTTGGGCTCCTCGGCTTTTTGAATGTCTTCGTCACCGCGTTGGAC
GCGGTCATCGGGTTTTCAAAGCACGCACGAAAGCACGATGATTCATTCAAACAGGCAAGCAGACTTCATCTAAAAATGAC
AGAGAGATCAATAATTGCTGCAACTCAAGAAGACTACAATGAGCTCTTTTCTCAATACAACGAAATACGAATAGAGAACC
CTCCTATATATAAAGCGCTCCGCGCTATATGTTACAACGAAGTCCTTGAAGTAAATAATTGGGAGCCAGAAGGAAAGATA
ATCATCCCTGAGCCAAAGCGGGTATTTGCTGCCTTCTTTCAGTTCTCAAGCTGGTCGCCTAAACGAGTGGGAGAGTTGAC
GCCCTCCAGATGA

Upstream 100 bases:

>100_bases
CCCCCGCCTACCCGATCAGTCCCTGTAAGACCTGCCGAGGCAAAACCGCAAGGTGCCCCCCCGGTCAAGCCCCCTAAAAA
TAAAGGCTGAGGTAACGGAC

Downstream 100 bases:

>100_bases
GCTTAGGAATAGATGCGTGTAGGCACAAGAATATATGGCAGCGCAGGGCAACCAGCTCGTACTAAATTACCCCCCACGCC
CGAAACCTCCCCCTGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MQEDIAVKFDQQLAYLEQDIRYYRKRSNFFDFLHTVTMIVVLLSSFAATISFVGEIFSDNYIKLMLGLLGFLNVFVTALD
AVIGFSKHARKHDDSFKQASRLHLKMTERSIIAATQEDYNELFSQYNEIRIENPPIYKALRAICYNEVLEVNNWEPEGKI
IIPEPKRVFAAFFQFSSWSPKRVGELTPSR

Sequences:

>Translated_190_residues
MQEDIAVKFDQQLAYLEQDIRYYRKRSNFFDFLHTVTMIVVLLSSFAATISFVGEIFSDNYIKLMLGLLGFLNVFVTALD
AVIGFSKHARKHDDSFKQASRLHLKMTERSIIAATQEDYNELFSQYNEIRIENPPIYKALRAICYNEVLEVNNWEPEGKI
IIPEPKRVFAAFFQFSSWSPKRVGELTPSR
>Mature_190_residues
MQEDIAVKFDQQLAYLEQDIRYYRKRSNFFDFLHTVTMIVVLLSSFAATISFVGEIFSDNYIKLMLGLLGFLNVFVTALD
AVIGFSKHARKHDDSFKQASRLHLKMTERSIIAATQEDYNELFSQYNEIRIENPPIYKALRAICYNEVLEVNNWEPEGKI
IIPEPKRVFAAFFQFSSWSPKRVGELTPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22119; Mature: 22119

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDIAVKFDQQLAYLEQDIRYYRKRSNFFDFLHTVTMIVVLLSSFAATISFVGEIFSDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YIKLMLGLLGFLNVFVTALDAVIGFSKHARKHDDSFKQASRLHLKMTERSIIAATQEDYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELFSQYNEIRIENPPIYKALRAICYNEVLEVNNWEPEGKIIIPEPKRVFAAFFQFSSWSP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCC
KRVGELTPSR
HHHCCCCCCC
>Mature Secondary Structure
MQEDIAVKFDQQLAYLEQDIRYYRKRSNFFDFLHTVTMIVVLLSSFAATISFVGEIFSDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YIKLMLGLLGFLNVFVTALDAVIGFSKHARKHDDSFKQASRLHLKMTERSIIAATQEDYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELFSQYNEIRIENPPIYKALRAICYNEVLEVNNWEPEGKIIIPEPKRVFAAFFQFSSWSP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHCCCCC
KRVGELTPSR
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA