Definition Agrobacterium vitis S4 plasmid pAtS4a, complete sequence.
Accession NC_011986
Length 78,730

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The map label for this gene is avhB4

Identifier: 222102347

GI number:

Start: 19318

End: 21777

Strand: Reverse

Name: avhB4

Synonym: Avi_9821

Alternate gene names: NA

Gene position: NA

Preceding gene: 222102348

Following gene: 222102346

Centisome position: NA

GC content: NA

Gene sequence:

>2460_bases
ATGCTGAAAGTCATCAAAGAAGAGCTAGGATTTGGGAAGGTCGCCGGAAACGAGCGGCCTATGTCCGTTCATATTCCCTA
CATGCGGCATGTCTCGGACACGGTGATAGGTCTCGAGAATGGATCACTCGCCAGTGTCATCAAGCTCGACGGCTTGTTTT
TCCAGACCGAAGACCAGGCCGAATTGAATATGCGATCAGTCGTCCAGAACACGATGATACGCGCGCTCGGCTCAAGCCGG
TTTTCCCTATGGTCAACCGTGATCCGTCGCGAGGTCGAGACCGAGATCGGCGGAACGTTTGATCAATCATTCTGCGACAT
CCTGAATACGCGATACATGGGTCAGCTTCGCAAGAAGCGCATGTTCACCAACGAGATCTACTTGACGATTGTCCGTTCGG
GCATGCGCGGCGCGCTTGGTGTTGGCGACTCTCTCAAGCGGATTTTTACGCAGTCCAACAAGGACGCCAAAACACAAGCC
ACGCGCGAAGAGGTAACGGACCTAGAGGAACTGATCGGGAATATCGTCCGTGAACTGAGTAAATATGGAGCCCGCTCGCT
CGGCATAACCTATCGGAAGAAGTCCGATGATATTGCAAAGATCGAGGGGCAGGAGGAAGAGACCAAGGGCGAACCGTATT
CCGAGCCCTGCGAATTCTTCAATTCTATCCTCACGGGGAGTGTGTCTCGAAAGATGCGACTGCCGCGCATGGGCATTCGC
AACTTCATTGGAACATCTCGTCTCCACTTCGCCAAGCGCGCCTTTCACGCGCAAGCCGCCGTGGACGAAGATTCGCGGTA
TGGCGCACTGCTGTCCATCAAGGAATACCCTCCTTTCACTGGACCTGGCATGTTGGACGGACTGTTACAGGTGAACCATG
AGTTCATCCTGACGCAGTCATTTACCCTTGCAGACAAGCCAATTGCGCAGGAGCGCATAACGCGCCTTCAGAGGCAAATC
CGTGCCTCGGATGAAGCTGGGACGTCTGTAGAATCTGACATCAATTTTGCTCTCGACAGTATGCTGAATCAGGAAGCCGT
GTTTGGCTTCCACCATTTTTCGCTACTTTGCATTTCCCGGGACCTCGAAGGCTTGAGCCGCTGCGTTTCGGAACTTGGTG
CATGCCTCACGGACATGAATATCAACTGGCTGCGTGAAGATCTCAATCTTGAGGCAGCGTTTTGGGCGCAGTTGCCCGGT
AACCATTCCTATATTGCTAGAAAGGCGATGCTCTCCAGCTCGAACTTCTCGGGCCTGTCATCAATGCACAATTTCGCCAG
TGGTCAGGCGGAACGTACGCATTGGGGCCTTCCCATCACGATCCTTGAGACGACATCGCAGACGCCCTACTGGTTCAATT
TCCACCGCCGCGATATCGGGCATTTTACCGTCACAGGACCGACCGGCTCGGGTAAAACTGTCGGTTTGAGTTTCCTGCTC
GCGCAGGCCATGCGAGTTTCCCCAACACCCCGCGCCGTCTTTTTTGATAAGGACCGCGGAGCCGAAATCTTCGTTCGAGC
CATCGGCGGATCTTACGAGATCCTTTCCCCGGGTACACCAACTGGATTCAATCCGCTCCAGTTGGAGAACACGGGACCAA
ACAGAGAATTTCTTCAGCGCCTTCTCAAGGCGATGCTCGGTGGACGTGATCGCCGCGACTTCACCCAGGAAGATGAAGAT
ATCATAGAGCGCGCTGTGGTCCGCCTCATGGAAGAACCGGCACAACAGCGAAACCTCACCAACCTTGGCAACCTGCTTAT
GGGCCGTGCCCGTGCTGATGCCAATGACCTCTATTCTCGACTTCGTCCTTGGACCGAGGGCGAAAAGGCTTGGCTCTTTA
ACGCTCCACACGATGTGCTGTCCTTCTCTGGCCGGACGGTGTTCGGCTTTGACATGACCAGTATTCTTGGGAACGAAGAA
CTGCGGACGCCCGCCCTCATGTATCTCTACCATCGGCTTGATGAACTGCTGGATGGCAATCCGGTCATGTTCTTCATGGA
CGAAGGCTGGCAGCTGCTCCTCGATGAAACTTTCAGCGCGTTCATTGTCGACAAAATGAAGACCATTCGTAAGCTCAACG
GCATCGTGGGCTTTGGCACTCAATCGGCCGCCGACATTGCAAAGTCGAAGGTCTCTCACACGCTCATTGAGCAGTCTTCC
ACGAACATTCATTTCCCGAACCCGCGTGCAGACGAAGAGAGCTACATCAAGCGCTTCGGTCTCACGGTGAAGGAATACAA
CTTCATCAAGAACACCCCGCCCGAAAAGCGAACCTTCCTGATCAAGCACGGCAATGACTCAGTCATCGCCCGGCTCGACC
TTTCGAGCATGCCCGATCTCGTCAAGGTCCTGTCCGGGCGTAAGGAGACGATCGAGGAGTGCGCCGCACTCCGCGAACAA
TATGGAGACGAGCCGGAAAACTGGTTGGCTAAATTTTGCGGATGGGAGAATGCTGAATGA

Upstream 100 bases:

>100_bases
GGGACGCGAAAATTCTCGACGTGCTTCAGGTTTCGTCACGCAAGACACCCCGCACTCCCAATAAGCGCTTTTGGGGCACC
AACTCGTACGGACCATAATC

Downstream 100 bases:

>100_bases
GGAAAAGTCCCACTCTGGTGCTGCTTGCTACAGCCATGTCGATTGGCGCTCCAAGCGCAGCCTTTACGCAGGTTCCAATC
ACCGACGCCGCACTAACGGC

Product: type IV secretion protein AvhB4

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>819_residues
MLKVIKEELGFGKVAGNERPMSVHIPYMRHVSDTVIGLENGSLASVIKLDGLFFQTEDQAELNMRSVVQNTMIRALGSSR
FSLWSTVIRREVETEIGGTFDQSFCDILNTRYMGQLRKKRMFTNEIYLTIVRSGMRGALGVGDSLKRIFTQSNKDAKTQA
TREEVTDLEELIGNIVRELSKYGARSLGITYRKKSDDIAKIEGQEEETKGEPYSEPCEFFNSILTGSVSRKMRLPRMGIR
NFIGTSRLHFAKRAFHAQAAVDEDSRYGALLSIKEYPPFTGPGMLDGLLQVNHEFILTQSFTLADKPIAQERITRLQRQI
RASDEAGTSVESDINFALDSMLNQEAVFGFHHFSLLCISRDLEGLSRCVSELGACLTDMNINWLREDLNLEAAFWAQLPG
NHSYIARKAMLSSSNFSGLSSMHNFASGQAERTHWGLPITILETTSQTPYWFNFHRRDIGHFTVTGPTGSGKTVGLSFLL
AQAMRVSPTPRAVFFDKDRGAEIFVRAIGGSYEILSPGTPTGFNPLQLENTGPNREFLQRLLKAMLGGRDRRDFTQEDED
IIERAVVRLMEEPAQQRNLTNLGNLLMGRARADANDLYSRLRPWTEGEKAWLFNAPHDVLSFSGRTVFGFDMTSILGNEE
LRTPALMYLYHRLDELLDGNPVMFFMDEGWQLLLDETFSAFIVDKMKTIRKLNGIVGFGTQSAADIAKSKVSHTLIEQSS
TNIHFPNPRADEESYIKRFGLTVKEYNFIKNTPPEKRTFLIKHGNDSVIARLDLSSMPDLVKVLSGRKETIEECAALREQ
YGDEPENWLAKFCGWENAE

Sequences:
NA

Specific function: NA

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA