Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340632

Identifier: 158340632

GI number: 158340632

Start: 146748

End: 146966

Strand: Reverse

Name: 158340632

Synonym: AM1_C0186

Alternate gene names: NA

Gene position: 146966-146748 (Counterclockwise)

Preceding gene: 158340633

Following gene: 158340630

Centisome position: 53.81

GC content: 42.92

Gene sequence:

>219_bases
GTGCAGCAGGTTTGTGGTGAGACCGTCAAGGTTGATGCTATTGAGCGTCAATCCAAAGGATTTGAAGTGTTGCCTAAGCG
CTGGATTGTCGAACGTAGTTTTGGATGGATGAACCGTTATCGACGTTTGAACAAAGACTATGAAATCTATACAGAAAATA
GTGAAGCAATGATTTTTGGCTCTTTCATTAGGCTTATGGTTCGCCGCCTAGCAGCTTAA

Upstream 100 bases:

>100_bases
GGGAGTTGTGTTTGTTCTAAGTGACGCCATGGAAAAACTCTCTCGCTTATAAGTGCTTTGGGTTGACCAAGGCTACTCAG
GACCAAACTTTCAGCGTGCT

Downstream 100 bases:

>100_bases
GGTTTAGTTTATAAATTAGCTCTTAGAGCGGGGTAGTTCATATAATTAAAAATCAAATAAGACTCTATCCATATAGGTAT
TAGCCCATTCTTTCCCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; IS5 Family Transposase

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQQVCGETVKVDAIERQSKGFEVLPKRWIVERSFGWMNRYRRLNKDYEIYTENSEAMIFGSFIRLMVRRLAA

Sequences:

>Translated_72_residues
MQQVCGETVKVDAIERQSKGFEVLPKRWIVERSFGWMNRYRRLNKDYEIYTENSEAMIFGSFIRLMVRRLAA
>Mature_72_residues
MQQVCGETVKVDAIERQSKGFEVLPKRWIVERSFGWMNRYRRLNKDYEIYTENSEAMIFGSFIRLMVRRLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8649; Mature: 8649

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVCGETVKVDAIERQSKGFEVLPKRWIVERSFGWMNRYRRLNKDYEIYTENSEAMIFG
CCCCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHH
SFIRLMVRRLAA
HHHHHHHHHHCC
>Mature Secondary Structure
MQQVCGETVKVDAIERQSKGFEVLPKRWIVERSFGWMNRYRRLNKDYEIYTENSEAMIFG
CCCCCCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHHH
SFIRLMVRRLAA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA