Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

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The map label for this gene is 158340628

Identifier: 158340628

GI number: 158340628

Start: 144498

End: 144878

Strand: Reverse

Name: 158340628

Synonym: AM1_C0182

Alternate gene names: NA

Gene position: 144878-144498 (Counterclockwise)

Preceding gene: 158340629

Following gene: 158340627

Centisome position: 53.05

GC content: 49.87

Gene sequence:

>381_bases
TTGTTCTTTGACGAATTTGCGGTGTCTGAGCGTCCTAGTTTGTTCTATGGCTGGGCAGAACGCAACACTCGTCCACAGGT
CAAGAGTAATGAGCGGGCTCGCAACAAGCTCAATGGGTTACTGTGCGTCGATGCCCACAGTGGCGAAGAGTATTTCGCTC
TGAGCCCACAGGCTAAAACGGAAGATATCTCTGAGTACTTTGCAGGCCTATGTCTGGATAGCGTTGAGCTGGGCTACACT
CAACTGTGCCTTATTCTCGATAACAATCCAACCCATAAGGGCAAGATGCGCTCCCAACTCGCTATCCACCTAGAGCAGAT
GGGGCTCACCCAATCGATTCAAGTTGAGTTTTTATATTGCCGTCCTACTCTCCCAAGTTGA

Upstream 100 bases:

>100_bases
CGCGCCCATCGTGACTATGCGAATGCTGACCTGAACGCCCAGAAAGAGTGGGTGGCGGCTGTTAAAAAAACTGCAATCAC
GACAATCGGATGAGCGCATC

Downstream 100 bases:

>100_bases
ACTTGGTTGAATGTGTGATTCACTTACTACGCTTACGATGTCTGCACCATCTCCCTCTTGGAACGACCCTGACACAGATC
AAACAACAGCTCCATGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT
QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYCRPTLPS

Sequences:

>Translated_126_residues
MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT
QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYCRPTLPS
>Mature_126_residues
MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT
QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYCRPTLPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14366; Mature: 14366

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKT
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCH
EDISEYFAGLCLDSVELGYTQLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYC
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE
RPTLPS
CCCCCC
>Mature Secondary Structure
MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKT
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCH
EDISEYFAGLCLDSVELGYTQLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYC
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE
RPTLPS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA