Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340628
Identifier: 158340628
GI number: 158340628
Start: 144498
End: 144878
Strand: Reverse
Name: 158340628
Synonym: AM1_C0182
Alternate gene names: NA
Gene position: 144878-144498 (Counterclockwise)
Preceding gene: 158340629
Following gene: 158340627
Centisome position: 53.05
GC content: 49.87
Gene sequence:
>381_bases TTGTTCTTTGACGAATTTGCGGTGTCTGAGCGTCCTAGTTTGTTCTATGGCTGGGCAGAACGCAACACTCGTCCACAGGT CAAGAGTAATGAGCGGGCTCGCAACAAGCTCAATGGGTTACTGTGCGTCGATGCCCACAGTGGCGAAGAGTATTTCGCTC TGAGCCCACAGGCTAAAACGGAAGATATCTCTGAGTACTTTGCAGGCCTATGTCTGGATAGCGTTGAGCTGGGCTACACT CAACTGTGCCTTATTCTCGATAACAATCCAACCCATAAGGGCAAGATGCGCTCCCAACTCGCTATCCACCTAGAGCAGAT GGGGCTCACCCAATCGATTCAAGTTGAGTTTTTATATTGCCGTCCTACTCTCCCAAGTTGA
Upstream 100 bases:
>100_bases CGCGCCCATCGTGACTATGCGAATGCTGACCTGAACGCCCAGAAAGAGTGGGTGGCGGCTGTTAAAAAAACTGCAATCAC GACAATCGGATGAGCGCATC
Downstream 100 bases:
>100_bases ACTTGGTTGAATGTGTGATTCACTTACTACGCTTACGATGTCTGCACCATCTCCCTCTTGGAACGACCCTGACACAGATC AAACAACAGCTCCATGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYCRPTLPS
Sequences:
>Translated_126_residues MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYCRPTLPS >Mature_126_residues MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKTEDISEYFAGLCLDSVELGYT QLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYCRPTLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14366; Mature: 14366
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKT CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCH EDISEYFAGLCLDSVELGYTQLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYC HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE RPTLPS CCCCCC >Mature Secondary Structure MFFDEFAVSERPSLFYGWAERNTRPQVKSNERARNKLNGLLCVDAHSGEEYFALSPQAKT CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEECCCCCEEEEECCCCCH EDISEYFAGLCLDSVELGYTQLCLILDNNPTHKGKMRSQLAIHLEQMGLTQSIQVEFLYC HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEE RPTLPS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA