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The map label for this gene is pilH [H]

Identifier: 158340626

GI number: 158340626

Start: 142953

End: 144125

Strand: Direct

Name: pilH [H]

Synonym: AM1_C0180

Alternate gene names: 158340626

Gene position: 142953-144125 (Clockwise)

Preceding gene: 158340625

Following gene: 158340631

Centisome position: 52.34

GC content: 38.45

Gene sequence:

>1173_bases
ATGAGTCATATTCATTCTTTTCCCTTTAGTAAGTTGGATTTCGTTAGCCAGCTCTTGGCAGCATTTCAATCCTCCCAGAA
CGGATATTGGCATTTCAATTTTTCAAACTCAAGTCTTTCACCTAATTATTCTGCATACTTAGGTGTAAATGAAAAAGGCA
CTGTGTGCTACGCAGGTAGCCATCGATTGACGAGTGAATCATTCCTTAGAACTGTTAAACGATTTAATGTGGCTGCTCGT
CAAGAAAAATATAAGCCCTACTTCTTGGAATGGTCTGCAACTATAGAGCAAGGGAATACCTCAATTTGCACTGTAATGAC
TGACATACTACTAAAGCGAGTCATTTCACCTAAGGAGTTAAGACAAGCCTTAAAACAAAAGATTCTACTCCAATTCGATA
ATCTATTCGCTGCTGAAAAAGGTGATGCCAGTTTCATTCTTGATTCACACCTGAATGTTATCGACCCTCTCCTTGGATTT
ACCGCACATGAAATTATCAGTGAAGGGTTACTTCGTCAAAAAAAATGGGAGCAACTAAAGTCGTTTATTCTATCAATGGA
TGGAATCCCAATAATTAACCACAACAAGTTGAATAAAACCAAATTGCCTCCGTTACAGAAAAAATTGCTTGAACGAATAT
CTAAGCATGAAAAGTCTTTGGAACAAATTTCCGTAGCTTTAGGCAAAGATCCATTAGAAATTGCTTCACTATTTGCCCAA
TGGGTGCAGTTAGAGCTAGTCGAGATTGAAAGACCCATGCAATTCGATTGTGCTCCCATCATGATTATTGATGACTCACC
ACTCGTTATTAAGCAATTTGACCACCTTGTTAGGGCATTAGGGCATCAAGTGGTGGCTTGCCAAACACCTGATAATGCCG
TTGATAAGATTCAACGAGTGAGACCTTCTATGGTTTTCATTGATATTAATATGCCTGGGATTACAGGCTTTGAACTAGTG
AAGCAGATACGCCAAAATAGCAAAATTGCATCTATTCCCCTTGTAATCCTAACGGGTGAACAAAAACTATCAAATAAATG
GCGCGCTCAATGGAGCGCATGTGAGTTTTTGACGAAGCCTTTAGGATTAGATGAAATCAAGTCCTTTCAGTCACAACTTA
AGGATTTAATTCAACAATTTGTTGAAGGAGAAAGCTGTTTAGTAACTGCTTAA

Upstream 100 bases:

>100_bases
AGAGTTTATGCTAAATAATTAAACACGGTGCTCAATATACTGTTACTTTGTTTGTATATGCAGCCTTTAAGATTCAAAGA
GTTTAACCAATAGAATAACC

Downstream 100 bases:

>100_bases
TTGAAGCAATATTTATTCAATCTAGTGAGGGTAGATTCCCCGCTGCTTGCAGCGAAGAAATGGGATTGTAATCCAAATCT
ACGGTTTGGGAGCAAATCGT

Product: response regulator, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSHIHSFPFSKLDFVSQLLAAFQSSQNGYWHFNFSNSSLSPNYSAYLGVNEKGTVCYAGSHRLTSESFLRTVKRFNVAAR
QEKYKPYFLEWSATIEQGNTSICTVMTDILLKRVISPKELRQALKQKILLQFDNLFAAEKGDASFILDSHLNVIDPLLGF
TAHEIISEGLLRQKKWEQLKSFILSMDGIPIINHNKLNKTKLPPLQKKLLERISKHEKSLEQISVALGKDPLEIASLFAQ
WVQLELVEIERPMQFDCAPIMIIDDSPLVIKQFDHLVRALGHQVVACQTPDNAVDKIQRVRPSMVFIDINMPGITGFELV
KQIRQNSKIASIPLVILTGEQKLSNKWRAQWSACEFLTKPLGLDEIKSFQSQLKDLIQQFVEGESCLVTA

Sequences:

>Translated_390_residues
MSHIHSFPFSKLDFVSQLLAAFQSSQNGYWHFNFSNSSLSPNYSAYLGVNEKGTVCYAGSHRLTSESFLRTVKRFNVAAR
QEKYKPYFLEWSATIEQGNTSICTVMTDILLKRVISPKELRQALKQKILLQFDNLFAAEKGDASFILDSHLNVIDPLLGF
TAHEIISEGLLRQKKWEQLKSFILSMDGIPIINHNKLNKTKLPPLQKKLLERISKHEKSLEQISVALGKDPLEIASLFAQ
WVQLELVEIERPMQFDCAPIMIIDDSPLVIKQFDHLVRALGHQVVACQTPDNAVDKIQRVRPSMVFIDINMPGITGFELV
KQIRQNSKIASIPLVILTGEQKLSNKWRAQWSACEFLTKPLGLDEIKSFQSQLKDLIQQFVEGESCLVTA
>Mature_389_residues
SHIHSFPFSKLDFVSQLLAAFQSSQNGYWHFNFSNSSLSPNYSAYLGVNEKGTVCYAGSHRLTSESFLRTVKRFNVAARQ
EKYKPYFLEWSATIEQGNTSICTVMTDILLKRVISPKELRQALKQKILLQFDNLFAAEKGDASFILDSHLNVIDPLLGFT
AHEIISEGLLRQKKWEQLKSFILSMDGIPIINHNKLNKTKLPPLQKKLLERISKHEKSLEQISVALGKDPLEIASLFAQW
VQLELVEIERPMQFDCAPIMIIDDSPLVIKQFDHLVRALGHQVVACQTPDNAVDKIQRVRPSMVFIDINMPGITGFELVK
QIRQNSKIASIPLVILTGEQKLSNKWRAQWSACEFLTKPLGLDEIKSFQSQLKDLIQQFVEGESCLVTA

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44287; Mature: 44156

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIHSFPFSKLDFVSQLLAAFQSSQNGYWHFNFSNSSLSPNYSAYLGVNEKGTVCYAGS
CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEECCC
HRLTSESFLRTVKRFNVAARQEKYKPYFLEWSATIEQGNTSICTVMTDILLKRVISPKEL
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHH
RQALKQKILLQFDNLFAAEKGDASFILDSHLNVIDPLLGFTAHEIISEGLLRQKKWEQLK
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFILSMDGIPIINHNKLNKTKLPPLQKKLLERISKHEKSLEQISVALGKDPLEIASLFAQ
HHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WVQLELVEIERPMQFDCAPIMIIDDSPLVIKQFDHLVRALGHQVVACQTPDNAVDKIQRV
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHC
RPSMVFIDINMPGITGFELVKQIRQNSKIASIPLVILTGEQKLSNKWRAQWSACEFLTKP
CCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHCC
LGLDEIKSFQSQLKDLIQQFVEGESCLVTA
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
SHIHSFPFSKLDFVSQLLAAFQSSQNGYWHFNFSNSSLSPNYSAYLGVNEKGTVCYAGS
CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEECCC
HRLTSESFLRTVKRFNVAARQEKYKPYFLEWSATIEQGNTSICTVMTDILLKRVISPKEL
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHH
RQALKQKILLQFDNLFAAEKGDASFILDSHLNVIDPLLGFTAHEIISEGLLRQKKWEQLK
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFILSMDGIPIINHNKLNKTKLPPLQKKLLERISKHEKSLEQISVALGKDPLEIASLFAQ
HHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
WVQLELVEIERPMQFDCAPIMIIDDSPLVIKQFDHLVRALGHQVVACQTPDNAVDKIQRV
HHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHC
RPSMVFIDINMPGITGFELVKQIRQNSKIASIPLVILTGEQKLSNKWRAQWSACEFLTKP
CCCEEEEEECCCCCCHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHCC
LGLDEIKSFQSQLKDLIQQFVEGESCLVTA
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]