Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340622
Identifier: 158340622
GI number: 158340622
Start: 136909
End: 137754
Strand: Reverse
Name: 158340622
Synonym: AM1_C0176
Alternate gene names: NA
Gene position: 137754-136909 (Counterclockwise)
Preceding gene: 158340623
Following gene: 158340621
Centisome position: 50.44
GC content: 48.7
Gene sequence:
>846_bases TTGAAGACAGATTCCATCTTCTATCGCATCTTCCAGACGGACCCCGGCATCTTGTTCGAGCTGCTGGGTCAATCCCCAGA CAGGGCTCAAGGCTATGAATTTAAGTCTGTTGAAATCAAGCAGGTTGCCTTTCGCATCGATGGTGTTTTCTTACCCACGC CCGAGGCGTCCGATCTGACGATCTGGTTCGTCGAAGTTCAGTTTCAACGGGACCCGGCGTTCTATCAACGGTTCTTCTCA GAGATTTATTTGTATCTCAACCTTCATCCAGAGACCGTGGACTGGCAAGCCGTTGTTATCTTTCCCAAACGCAGCATTGA GCCAGACTATCCCCATGTATTCCGGGCCAATCTGAATAGCGATCAGGTGCATCGCGTTTACTTGGAAGACTTGGATGAAT CCGTTGACTCTCTTGGCGTGGGACTGATGCAGTTGATTGTGGCTGATTCAGGAGATACCGCCACCCAGGCTCAAGCTTTG CTTTCAAGGGTTCAGCCTCAAGAACAGACAAATCCAAGATTTGCGGCGATAATGGAGTTAATTGAAACAATTGTGGTCTA TAAATTTCCACAATTGAGCCGAGAAGAGATAGAGAGCATGTTGGGCTTAAGCGAACTCAAGCAAACTAAGGTATACCAGG AAGCCTTGGACGAAGGCCGTCAGGAAGAGGGGCAATCTCTTATTCTTCGCCTACTCACCCGTCGTATTGGTGACGTTGCT CCTGAGTTGAGATCGCAGATCCGAGCTCTATCCCTAGTTCAGATTGAAGCTTTGGGTGAGGCATTGCTCGACTTTAAGCA ACCTGCTGATCTAGTGAACTGGTTGCAGGATCACCGATCTGAGTAA
Upstream 100 bases:
>100_bases CTATCCATGGTCCTTGTCCATATCCTCTAAACACTACCGAGCTTTTAGAGTCACTTCCATCCAGTAGAATGACTGGCATA GCTCAGGAGTACGGCACCTC
Downstream 100 bases:
>100_bases CAAGGGACTACTTCTCAAAGCAAGCTTAGGCAGGGCTTTCAGGTCAGGCGATTATTTTCTAGGAGTAATTGAAGGGTCGA TACTGTTGGCGAATTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLTIWFVEVQFQRDPAFYQRFFS EIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNSDQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQAL LSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE
Sequences:
>Translated_281_residues MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLTIWFVEVQFQRDPAFYQRFFS EIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNSDQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQAL LSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE >Mature_281_residues MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLTIWFVEVQFQRDPAFYQRFFS EIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNSDQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQAL LSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32340; Mature: 32340
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLT CCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEE IWFVEVQFQRDPAFYQRFFSEIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNS EEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCCC DQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMEL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH IETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLT CCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEE IWFVEVQFQRDPAFYQRFFSEIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNS EEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCCC DQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMEL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH IETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA