Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340622

Identifier: 158340622

GI number: 158340622

Start: 136909

End: 137754

Strand: Reverse

Name: 158340622

Synonym: AM1_C0176

Alternate gene names: NA

Gene position: 137754-136909 (Counterclockwise)

Preceding gene: 158340623

Following gene: 158340621

Centisome position: 50.44

GC content: 48.7

Gene sequence:

>846_bases
TTGAAGACAGATTCCATCTTCTATCGCATCTTCCAGACGGACCCCGGCATCTTGTTCGAGCTGCTGGGTCAATCCCCAGA
CAGGGCTCAAGGCTATGAATTTAAGTCTGTTGAAATCAAGCAGGTTGCCTTTCGCATCGATGGTGTTTTCTTACCCACGC
CCGAGGCGTCCGATCTGACGATCTGGTTCGTCGAAGTTCAGTTTCAACGGGACCCGGCGTTCTATCAACGGTTCTTCTCA
GAGATTTATTTGTATCTCAACCTTCATCCAGAGACCGTGGACTGGCAAGCCGTTGTTATCTTTCCCAAACGCAGCATTGA
GCCAGACTATCCCCATGTATTCCGGGCCAATCTGAATAGCGATCAGGTGCATCGCGTTTACTTGGAAGACTTGGATGAAT
CCGTTGACTCTCTTGGCGTGGGACTGATGCAGTTGATTGTGGCTGATTCAGGAGATACCGCCACCCAGGCTCAAGCTTTG
CTTTCAAGGGTTCAGCCTCAAGAACAGACAAATCCAAGATTTGCGGCGATAATGGAGTTAATTGAAACAATTGTGGTCTA
TAAATTTCCACAATTGAGCCGAGAAGAGATAGAGAGCATGTTGGGCTTAAGCGAACTCAAGCAAACTAAGGTATACCAGG
AAGCCTTGGACGAAGGCCGTCAGGAAGAGGGGCAATCTCTTATTCTTCGCCTACTCACCCGTCGTATTGGTGACGTTGCT
CCTGAGTTGAGATCGCAGATCCGAGCTCTATCCCTAGTTCAGATTGAAGCTTTGGGTGAGGCATTGCTCGACTTTAAGCA
ACCTGCTGATCTAGTGAACTGGTTGCAGGATCACCGATCTGAGTAA

Upstream 100 bases:

>100_bases
CTATCCATGGTCCTTGTCCATATCCTCTAAACACTACCGAGCTTTTAGAGTCACTTCCATCCAGTAGAATGACTGGCATA
GCTCAGGAGTACGGCACCTC

Downstream 100 bases:

>100_bases
CAAGGGACTACTTCTCAAAGCAAGCTTAGGCAGGGCTTTCAGGTCAGGCGATTATTTTCTAGGAGTAATTGAAGGGTCGA
TACTGTTGGCGAATTCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLTIWFVEVQFQRDPAFYQRFFS
EIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNSDQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQAL
LSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA
PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE

Sequences:

>Translated_281_residues
MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLTIWFVEVQFQRDPAFYQRFFS
EIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNSDQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQAL
LSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA
PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE
>Mature_281_residues
MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLTIWFVEVQFQRDPAFYQRFFS
EIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNSDQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQAL
LSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA
PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32340; Mature: 32340

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLT
CCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEE
IWFVEVQFQRDPAFYQRFFSEIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNS
EEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCCC
DQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
IETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTDSIFYRIFQTDPGILFELLGQSPDRAQGYEFKSVEIKQVAFRIDGVFLPTPEASDLT
CCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCEE
IWFVEVQFQRDPAFYQRFFSEIYLYLNLHPETVDWQAVVIFPKRSIEPDYPHVFRANLNS
EEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEECCCCC
DQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
IETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILRLLTRRIGDVA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PELRSQIRALSLVQIEALGEALLDFKQPADLVNWLQDHRSE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA