Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340619
Identifier: 158340619
GI number: 158340619
Start: 133928
End: 134098
Strand: Reverse
Name: 158340619
Synonym: AM1_C0171
Alternate gene names: NA
Gene position: 134098-133928 (Counterclockwise)
Preceding gene: 158340620
Following gene: 158340616
Centisome position: 49.1
GC content: 44.44
Gene sequence:
>171_bases ATGATTTCCATTGAAAAACCTGAGCTGGACAAACCCCACACAGTTTATCTGGCTACGGTTGAGGAGCTAATGGAAGACTT TTACAACATTAGTCAGAAAATGTCGGAATGTGGCGAGTCTTGGAAAATTACGCTGGAACGGCCAAAATTCGACACTGAAG ACGGGGAGTGA
Upstream 100 bases:
>100_bases CCGCTGGTTCTATCGACTCTCTGATGTCCCCGATTAAGAGGCCATCTGGGAACCGACTTGGTGGGTCGAGGAACAGCTCT GGCCTGCCCTTGATTGTTTC
Downstream 100 bases:
>100_bases TAAGGGAGCAGTGCCAGCCTAAACTCTGACTTGGTCTGGGAGTCTTTCTGCTGCTGTTTCTAGATCATTGGGGACATAGC GAAAACAGGGAAGTTGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MISIEKPELDKPHTVYLATVEELMEDFYNISQKMSECGESWKITLERPKFDTEDGE
Sequences:
>Translated_56_residues MISIEKPELDKPHTVYLATVEELMEDFYNISQKMSECGESWKITLERPKFDTEDGE >Mature_56_residues MISIEKPELDKPHTVYLATVEELMEDFYNISQKMSECGESWKITLERPKFDTEDGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6582; Mature: 6582
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIEKPELDKPHTVYLATVEELMEDFYNISQKMSECGESWKITLERPKFDTEDGE CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MISIEKPELDKPHTVYLATVEELMEDFYNISQKMSECGESWKITLERPKFDTEDGE CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA