Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340618
Identifier: 158340618
GI number: 158340618
Start: 132749
End: 133909
Strand: Direct
Name: 158340618
Synonym: AM1_C0170
Alternate gene names: NA
Gene position: 132749-133909 (Clockwise)
Preceding gene: 158340617
Following gene: 158340625
Centisome position: 48.6
GC content: 45.56
Gene sequence:
>1161_bases ATGTGGAAAAAACTATTCTGGTTGCTGGGAACCCTATTGCTCGCGACGATCTTATGTCAAACACTCTTGACGGCGGTAAT TGCCTTGGGATGGATATATCGATGGGTCAAACATCAAGTCAGCAAAACCATTTTCACGCAATCTAAGTTAGCTGAGACCA CCACCTGGCACACGTTTGTCAGCAGATTTCCTGCGCTTATGCCTGTGCGGGACAAACCCTACTTTTTTCGCCGACAAATA GGCGTTTCATCTCCAAAGCATCTCCTCTTCAACAAATTACACTGGCTGTTGCACTCCTTATGGGTGAATCTAAAAACCGG GGTTGCTAGCATCTTGACGACTTGGTCATGTACTTTATTGCCCTGCATCCTCTGGGCAACAGCCTGGTACGTAGGCTGGC ATATTTCCTTCAACAAACTATATGAGGAATCCGAGACTGGAATCTCTTTAGGCATTCTGGGGATGCTCATGTTCATGGTG GCCATGCTATATGTACCTGCGGCCCAAGCTCGACAAGCCTTTACGGGGGATTGGCGCAGTTTTTTTCAACTCAGATTTGT GCAAGCAATTGTCTGCTCTCGATCTTTGCAATACTTTTTTCTCTCAATTGGCTATGTTATCAGCAGTTTTTTCTTAACCC TAGGTAAAGCCATACCCGTTTTTTTGCCAAACACTAATCCTAATCTCTCAGCGCTAACAGCATCAGAGGCATTGGAGTAC TTGAATCAATATTATTTGCTGATAGGTGTGCTTGGATTCCTGTTGGTGTGGGGTCTAAGAATGGCCGGGGGCTGTATTTA TGCTGGGGCTCTAGTTGATCTCTGGCAGCAATCGTCACAACCACAGAGTGCGTTTCACCCCAACGAATCACACTTTCTCC AGTTGGTGGACATCCAGTATGGTAGTACCCATCATTCAACCCATGTCATCAGAAAAATCTTGTGGTTACCCGTTTCTGTC AGCTATCGAGTGATAGCCATGACTTTCTCTTTATTGGTTTGGGCTCTCGTTAGTTTTATGCCCTTCGCCTCTCAATTTGC TAATTATGCTCCAGTGAGGGGCTTTCTTAATCAGCCATTAGTGCAACTTCCCTGTTTTCGCTATGTCCCCAATGATCTAG AAACAGCAGCAGAAAGACTCCCAGACCAAGTCAGAGTTTAG
Upstream 100 bases:
>100_bases CCACGCTTGCTCAAATTATGGGGTTTAAGGCCGACTACGCCGAAGGAAGCGTTCTAGAAGAGATCTTTACCTAGTCAAAC GAGGTACAGCCGTTATCAAA
Downstream 100 bases:
>100_bases GCTGGCACTGCTCCCTTATCACTCCCCGTCTTCAGTGTCGAATTTTGGCCGTTCCAGCGTAATTTTCCAAGACTCGCCAC ATTCCGACATTTTCTGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MWKKLFWLLGTLLLATILCQTLLTAVIALGWIYRWVKHQVSKTIFTQSKLAETTTWHTFVSRFPALMPVRDKPYFFRRQI GVSSPKHLLFNKLHWLLHSLWVNLKTGVASILTTWSCTLLPCILWATAWYVGWHISFNKLYEESETGISLGILGMLMFMV AMLYVPAAQARQAFTGDWRSFFQLRFVQAIVCSRSLQYFFLSIGYVISSFFLTLGKAIPVFLPNTNPNLSALTASEALEY LNQYYLLIGVLGFLLVWGLRMAGGCIYAGALVDLWQQSSQPQSAFHPNESHFLQLVDIQYGSTHHSTHVIRKILWLPVSV SYRVIAMTFSLLVWALVSFMPFASQFANYAPVRGFLNQPLVQLPCFRYVPNDLETAAERLPDQVRV
Sequences:
>Translated_386_residues MWKKLFWLLGTLLLATILCQTLLTAVIALGWIYRWVKHQVSKTIFTQSKLAETTTWHTFVSRFPALMPVRDKPYFFRRQI GVSSPKHLLFNKLHWLLHSLWVNLKTGVASILTTWSCTLLPCILWATAWYVGWHISFNKLYEESETGISLGILGMLMFMV AMLYVPAAQARQAFTGDWRSFFQLRFVQAIVCSRSLQYFFLSIGYVISSFFLTLGKAIPVFLPNTNPNLSALTASEALEY LNQYYLLIGVLGFLLVWGLRMAGGCIYAGALVDLWQQSSQPQSAFHPNESHFLQLVDIQYGSTHHSTHVIRKILWLPVSV SYRVIAMTFSLLVWALVSFMPFASQFANYAPVRGFLNQPLVQLPCFRYVPNDLETAAERLPDQVRV >Mature_386_residues MWKKLFWLLGTLLLATILCQTLLTAVIALGWIYRWVKHQVSKTIFTQSKLAETTTWHTFVSRFPALMPVRDKPYFFRRQI GVSSPKHLLFNKLHWLLHSLWVNLKTGVASILTTWSCTLLPCILWATAWYVGWHISFNKLYEESETGISLGILGMLMFMV AMLYVPAAQARQAFTGDWRSFFQLRFVQAIVCSRSLQYFFLSIGYVISSFFLTLGKAIPVFLPNTNPNLSALTASEALEY LNQYYLLIGVLGFLLVWGLRMAGGCIYAGALVDLWQQSSQPQSAFHPNESHFLQLVDIQYGSTHHSTHVIRKILWLPVSV SYRVIAMTFSLLVWALVSFMPFASQFANYAPVRGFLNQPLVQLPCFRYVPNDLETAAERLPDQVRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44167; Mature: 44167
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKKLFWLLGTLLLATILCQTLLTAVIALGWIYRWVKHQVSKTIFTQSKLAETTTWHTFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRFPALMPVRDKPYFFRRQIGVSSPKHLLFNKLHWLLHSLWVNLKTGVASILTTWSCTLL HHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PCILWATAWYVGWHISFNKLYEESETGISLGILGMLMFMVAMLYVPAAQARQAFTGDWRS HHHHHHHHHHHHHEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FFQLRFVQAIVCSRSLQYFFLSIGYVISSFFLTLGKAIPVFLPNTNPNLSALTASEALEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHH LNQYYLLIGVLGFLLVWGLRMAGGCIYAGALVDLWQQSSQPQSAFHPNESHFLQLVDIQY HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEC GSTHHSTHVIRKILWLPVSVSYRVIAMTFSLLVWALVSFMPFASQFANYAPVRGFLNQPL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCH VQLPCFRYVPNDLETAAERLPDQVRV HHCCHHHHCCCHHHHHHHHCCHHCCC >Mature Secondary Structure MWKKLFWLLGTLLLATILCQTLLTAVIALGWIYRWVKHQVSKTIFTQSKLAETTTWHTFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRFPALMPVRDKPYFFRRQIGVSSPKHLLFNKLHWLLHSLWVNLKTGVASILTTWSCTLL HHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PCILWATAWYVGWHISFNKLYEESETGISLGILGMLMFMVAMLYVPAAQARQAFTGDWRS HHHHHHHHHHHHHEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH FFQLRFVQAIVCSRSLQYFFLSIGYVISSFFLTLGKAIPVFLPNTNPNLSALTASEALEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHH LNQYYLLIGVLGFLLVWGLRMAGGCIYAGALVDLWQQSSQPQSAFHPNESHFLQLVDIQY HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEEEEC GSTHHSTHVIRKILWLPVSVSYRVIAMTFSLLVWALVSFMPFASQFANYAPVRGFLNQPL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCH VQLPCFRYVPNDLETAAERLPDQVRV HHCCHHHHCCCHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA