Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340617
Identifier: 158340617
GI number: 158340617
Start: 131544
End: 132722
Strand: Direct
Name: 158340617
Synonym: AM1_C0169
Alternate gene names: NA
Gene position: 131544-132722 (Clockwise)
Preceding gene: 158340613
Following gene: 158340618
Centisome position: 48.16
GC content: 46.56
Gene sequence:
>1179_bases ATGGACTCTCCACAACTGAATCGCAGGCAATTCCTTACCTATCTGAGTGCTAGTACAGCATCGCTGCTGGTTCACCCAAA ACAGGCAATCGCTTTTCCCTCAGAGAATCAGGATTACTCTGGTCCCAACGTCATTTTGATTCGCTTTGGAGGAGGGGTTC GGCGAAGGGAAACGATCGATCCAGATTACACCTATGCTCCCTATCTGCGCCACATTCTGGCATCTCGCGGTATCCTGTTT AGCAATATGATGTTGGACCAGCTCCGACACGTCACGACCAGCCATGGGGAAGGAACACTCTACCTGTTAACAGGTAAGTA TGATGGGTTCAGCAAAAAACCAGGACTGCGAAATCGTTTCGAGCCCCAAGTTCCCACACTTTTTGAATATTTACGCAAAA CATTCGCCATACCAGACCACCAAACCCTGTTAATTAATGGTGAAAATCGTGCCACTGAAGAGTTCTTCTCCTTCAGCAAT CACCATATGTTTGGTGCCAACTATCGTTGTCAGGTTCTTAGCTTATATCGCTTTAAAGTGTTTCTTCTGCGTCAGCAGCT TAACCAGGGAGACTTAACAGGACAAGAGCAAAAGGAAGCCGTCCAAGCGTTACAGGAACTAGAGACTCTTGATTACCGAA ATCAAGGGCAATTTCCCTATTCCCCAAAACTTACAGAGTTTTGGCAGGAGTGGCAGAACTACTATGGTACGACTGGCTTA GTGAATCCTCGTGGTGACCGGTTGTTAACAGAGTTAGCAATCTGGGCAATCAAGCGTCTACAACCCAAACTGTTGATGAT CAATTACAACGACCCTGATTATGTTCACTGGGGTTTTCCCTCTCATTACACAAATGGCATCGCTGTTATTGATCGGGGGA TACAGCGCATCGTCGAGGCCGTAGATTCGGATGACTATTATCGGAACAACACCGTATTTTGTATCGTTCCAGATTGTGGT CGCGACTCTAATCCCTTCCTTTCTGTCCCCTATCAACATCACTTCAATTCACGATCGGCTCACGAAATCTTTGCCTTATT TTTTGGTAAAGGAATCCAATCGGGGCAAGTTGTGGATCGCCCCGTTTCTCAGATTGATGTAACCCCCACGCTTGCTCAAA TTATGGGGTTTAAGGCCGACTACGCCGAAGGAAGCGTTCTAGAAGAGATCTTTACCTAG
Upstream 100 bases:
>100_bases CCGTAGACTTTGAAATTTTACCGCTAAACTAGCAGTGCAATAGAGCAACATTCCTGCTTTGCTTTCTGCCTATCTTTAAC TTCCACTTGATGGAGTAGAT
Downstream 100 bases:
>100_bases TCAAACGAGGTACAGCCGTTATCAAAATGTGGAAAAAACTATTCTGGTTGCTGGGAACCCTATTGCTCGCGACGATCTTA TGTCAAACACTCTTGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MDSPQLNRRQFLTYLSASTASLLVHPKQAIAFPSENQDYSGPNVILIRFGGGVRRRETIDPDYTYAPYLRHILASRGILF SNMMLDQLRHVTTSHGEGTLYLLTGKYDGFSKKPGLRNRFEPQVPTLFEYLRKTFAIPDHQTLLINGENRATEEFFSFSN HHMFGANYRCQVLSLYRFKVFLLRQQLNQGDLTGQEQKEAVQALQELETLDYRNQGQFPYSPKLTEFWQEWQNYYGTTGL VNPRGDRLLTELAIWAIKRLQPKLLMINYNDPDYVHWGFPSHYTNGIAVIDRGIQRIVEAVDSDDYYRNNTVFCIVPDCG RDSNPFLSVPYQHHFNSRSAHEIFALFFGKGIQSGQVVDRPVSQIDVTPTLAQIMGFKADYAEGSVLEEIFT
Sequences:
>Translated_392_residues MDSPQLNRRQFLTYLSASTASLLVHPKQAIAFPSENQDYSGPNVILIRFGGGVRRRETIDPDYTYAPYLRHILASRGILF SNMMLDQLRHVTTSHGEGTLYLLTGKYDGFSKKPGLRNRFEPQVPTLFEYLRKTFAIPDHQTLLINGENRATEEFFSFSN HHMFGANYRCQVLSLYRFKVFLLRQQLNQGDLTGQEQKEAVQALQELETLDYRNQGQFPYSPKLTEFWQEWQNYYGTTGL VNPRGDRLLTELAIWAIKRLQPKLLMINYNDPDYVHWGFPSHYTNGIAVIDRGIQRIVEAVDSDDYYRNNTVFCIVPDCG RDSNPFLSVPYQHHFNSRSAHEIFALFFGKGIQSGQVVDRPVSQIDVTPTLAQIMGFKADYAEGSVLEEIFT >Mature_392_residues MDSPQLNRRQFLTYLSASTASLLVHPKQAIAFPSENQDYSGPNVILIRFGGGVRRRETIDPDYTYAPYLRHILASRGILF SNMMLDQLRHVTTSHGEGTLYLLTGKYDGFSKKPGLRNRFEPQVPTLFEYLRKTFAIPDHQTLLINGENRATEEFFSFSN HHMFGANYRCQVLSLYRFKVFLLRQQLNQGDLTGQEQKEAVQALQELETLDYRNQGQFPYSPKLTEFWQEWQNYYGTTGL VNPRGDRLLTELAIWAIKRLQPKLLMINYNDPDYVHWGFPSHYTNGIAVIDRGIQRIVEAVDSDDYYRNNTVFCIVPDCG RDSNPFLSVPYQHHFNSRSAHEIFALFFGKGIQSGQVVDRPVSQIDVTPTLAQIMGFKADYAEGSVLEEIFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45138; Mature: 45138
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSPQLNRRQFLTYLSASTASLLVHPKQAIAFPSENQDYSGPNVILIRFGGGVRRRETID CCCCCCCHHHHHHHHHCCCCEEEECCHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCC PDYTYAPYLRHILASRGILFSNMMLDQLRHVTTSHGEGTLYLLTGKYDGFSKKPGLRNRF CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC EPQVPTLFEYLRKTFAIPDHQTLLINGENRATEEFFSFSNHHMFGANYRCQVLSLYRFKV CCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCEEECCCCCEEHHHHHHHHH FLLRQQLNQGDLTGQEQKEAVQALQELETLDYRNQGQFPYSPKLTEFWQEWQNYYGTTGL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC VNPRGDRLLTELAIWAIKRLQPKLLMINYNDPDYVHWGFPSHYTNGIAVIDRGIQRIVEA CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHCCCHHHHHHHHHHHHHH VDSDDYYRNNTVFCIVPDCGRDSNPFLSVPYQHHFNSRSAHEIFALFFGKGIQSGQVVDR HCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC PVSQIDVTPTLAQIMGFKADYAEGSVLEEIFT CHHHCCCCHHHHHHHCCCCCCCCCHHHHHHCC >Mature Secondary Structure MDSPQLNRRQFLTYLSASTASLLVHPKQAIAFPSENQDYSGPNVILIRFGGGVRRRETID CCCCCCCHHHHHHHHHCCCCEEEECCHHHEECCCCCCCCCCCCEEEEEECCCCCCCCCCC PDYTYAPYLRHILASRGILFSNMMLDQLRHVTTSHGEGTLYLLTGKYDGFSKKPGLRNRF CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCC EPQVPTLFEYLRKTFAIPDHQTLLINGENRATEEFFSFSNHHMFGANYRCQVLSLYRFKV CCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCEEECCCCCEEHHHHHHHHH FLLRQQLNQGDLTGQEQKEAVQALQELETLDYRNQGQFPYSPKLTEFWQEWQNYYGTTGL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC VNPRGDRLLTELAIWAIKRLQPKLLMINYNDPDYVHWGFPSHYTNGIAVIDRGIQRIVEA CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHCCCHHHHHHHHHHHHHH VDSDDYYRNNTVFCIVPDCGRDSNPFLSVPYQHHFNSRSAHEIFALFFGKGIQSGQVVDR HCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC PVSQIDVTPTLAQIMGFKADYAEGSVLEEIFT CHHHCCCCHHHHHHHCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA