Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340614
Identifier: 158340614
GI number: 158340614
Start: 129694
End: 130485
Strand: Reverse
Name: 158340614
Synonym: AM1_C0166
Alternate gene names: NA
Gene position: 130485-129694 (Counterclockwise)
Preceding gene: 158340615
Following gene: 158340612
Centisome position: 47.78
GC content: 50.88
Gene sequence:
>792_bases TTGGAAACCATCTTGAAGCGTGATCGCTGGATCGTTCTGGCTGGCTTAACAGTCGTCATCTTGCTGTCTTGGATCTATCT CCTACTTGGGGCAGGGATGGGGATGAGTGGGATAGAGATGACGCGTCTTTCGTCCGGTGACGGCATGATGATGGACATGG GAGAAACCACAACATGGAGTATTGGCTATGGCCTGCTGATGTTCTTCATGTGGTGGATCATGATGATTGCCATGATGCTA CCCAGCGCCACCCCGATGATTTTGCTTGCCGCTGCCTTAAATCGAAAGGCATCACCCCATCGCCAGCCCTATGGGACATC CGGCTATTTCGCAGCTGGCTACCTGCTGGCCTGGGCGTTATTTAGCGGTGTTGCGGTTGTTGTGCAATGGGGTCTTACCG TAAGCGGATTGCTTTCTTCGCTAATGCAAAGTACAAACACCGTGCTGACTGGTGGCATCTTGATTGCAGCGGGACTTTGG CAGCTTACCCCGATCAAACATAATTGCCTTAAACACTGCCGTTCCCCAGTGAAGTTCTTGGTTCAACATCGGCGTCAAAG CAATACCGGGAGTCTGATCATGGGTTTAGAGCACGGTATGTACTGTATGGGATGCTGCTGGTTCTTAATGGCATTGCTGC TAGTGGGAGGGGTTATGAATTTGTATTGGATTACGGGCCTCGCCCTATATGTTCTCGTTGAGAAGGTGTTACCCAAAGGA GAGCAAGTTGGCCAAATTGTGGGGGTAGGTTTGGTGGCCTGGGGATTTGGCTGGGTTATTGGTATTCTCTGA
Upstream 100 bases:
>100_bases TTGCAAGACACCTATGGCCAATTCAACATCCTGCGCCATTCTGGCAGTGGTGTCGTACATCGCTAACGCATGGAGGTTGA GTCTATTGACATCAATCCAA
Downstream 100 bases:
>100_bases ATCCTCTTGACTTAGCGATTTTCTTTCAAAAAGGTAGTTTGCCCTGACTTTGAGGTGTTTAAAGAACTTGGTCAAGATTT TTCGTTTGCTGCCGAGAAGG
Product: metal-binding integral membrane protein, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues METILKRDRWIVLAGLTVVILLSWIYLLLGAGMGMSGIEMTRLSSGDGMMMDMGETTTWSIGYGLLMFFMWWIMMIAMML PSATPMILLAAALNRKASPHRQPYGTSGYFAAGYLLAWALFSGVAVVVQWGLTVSGLLSSLMQSTNTVLTGGILIAAGLW QLTPIKHNCLKHCRSPVKFLVQHRRQSNTGSLIMGLEHGMYCMGCCWFLMALLLVGGVMNLYWITGLALYVLVEKVLPKG EQVGQIVGVGLVAWGFGWVIGIL
Sequences:
>Translated_263_residues METILKRDRWIVLAGLTVVILLSWIYLLLGAGMGMSGIEMTRLSSGDGMMMDMGETTTWSIGYGLLMFFMWWIMMIAMML PSATPMILLAAALNRKASPHRQPYGTSGYFAAGYLLAWALFSGVAVVVQWGLTVSGLLSSLMQSTNTVLTGGILIAAGLW QLTPIKHNCLKHCRSPVKFLVQHRRQSNTGSLIMGLEHGMYCMGCCWFLMALLLVGGVMNLYWITGLALYVLVEKVLPKG EQVGQIVGVGLVAWGFGWVIGIL >Mature_263_residues METILKRDRWIVLAGLTVVILLSWIYLLLGAGMGMSGIEMTRLSSGDGMMMDMGETTTWSIGYGLLMFFMWWIMMIAMML PSATPMILLAAALNRKASPHRQPYGTSGYFAAGYLLAWALFSGVAVVVQWGLTVSGLLSSLMQSTNTVLTGGILIAAGLW QLTPIKHNCLKHCRSPVKFLVQHRRQSNTGSLIMGLEHGMYCMGCCWFLMALLLVGGVMNLYWITGLALYVLVEKVLPKG EQVGQIVGVGLVAWGFGWVIGIL
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28804; Mature: 28804
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 8.0 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METILKRDRWIVLAGLTVVILLSWIYLLLGAGMGMSGIEMTRLSSGDGMMMDMGETTTWS CCCHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCHH IGYGLLMFFMWWIMMIAMMLPSATPMILLAAALNRKASPHRQPYGTSGYFAAGYLLAWAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH FSGVAVVVQWGLTVSGLLSSLMQSTNTVLTGGILIAAGLWQLTPIKHNCLKHCRSPVKFL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VQHRRQSNTGSLIMGLEHGMYCMGCCWFLMALLLVGGVMNLYWITGLALYVLVEKVLPKG HHHHHCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQVGQIVGVGLVAWGFGWVIGIL HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METILKRDRWIVLAGLTVVILLSWIYLLLGAGMGMSGIEMTRLSSGDGMMMDMGETTTWS CCCHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCCHH IGYGLLMFFMWWIMMIAMMLPSATPMILLAAALNRKASPHRQPYGTSGYFAAGYLLAWAL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH FSGVAVVVQWGLTVSGLLSSLMQSTNTVLTGGILIAAGLWQLTPIKHNCLKHCRSPVKFL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VQHRRQSNTGSLIMGLEHGMYCMGCCWFLMALLLVGGVMNLYWITGLALYVLVEKVLPKG HHHHHCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQVGQIVGVGLVAWGFGWVIGIL HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA