Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340612
Identifier: 158340612
GI number: 158340612
Start: 128481
End: 128879
Strand: Reverse
Name: 158340612
Synonym: AM1_C0164
Alternate gene names: NA
Gene position: 128879-128481 (Counterclockwise)
Preceding gene: 158340614
Following gene: 158340611
Centisome position: 47.19
GC content: 46.62
Gene sequence:
>399_bases ATGGAATTCGTCCACCATTTCCAAGGCAACTTGGAAATCATCGTATCTTTTTTAGAAGTAGTACTGGAAGCAGTAGCGGC TTTTTGTATTGTGTTGGGCCTGCTCGTGAGCATCAAGCTCTCGGTTGTTTTGCGCCGTCGTCGCTCAACCATACAGTTCC CATTGGGACGATTGCGGTTAACTTTTGGACGATGGTTAGCATTAGCTCTGGAGTTTCAATTGGGGGCAGATGTCTTAGCC ACGACCGTTGCTCCTACGTTTGAGGCACTCGGGAAACTGGGTGCCATCGCAATCATTCGTACCTTTCTCAACTACTTTCT GAACAAAGAACTGATCGAGGTCTTTGAGATGCAAAAGCGCTTTGATGAGGACGAGACGGAATTATCCAACTCCAATTAA
Upstream 100 bases:
>100_bases GCCTTTGAGTTGTCAATCCTCCTGCAAGATTAACTCAATAAAGGTACACAACAGGGTAGTCTCTTTGGCAGGGTGTTGTG CTGGTCAAGGTTGAAGCTTG
Downstream 100 bases:
>100_bases CCAGACCTGGATGTGAGTTGGATAATTCTAGTTGAGTGAGGATGGTTTAGCATCTTCACTTCTGCTTAGCCCTCTTTTAT CACTTTGGTAGAAGAGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRLTFGRWLALALEFQLGADVLA TTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKRFDEDETELSNSN
Sequences:
>Translated_132_residues MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRLTFGRWLALALEFQLGADVLA TTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKRFDEDETELSNSN >Mature_132_residues MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRLTFGRWLALALEFQLGADVLA TTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKRFDEDETELSNSN
Specific function: Unknown
COG id: COG4828
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14973; Mature: 14973
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRL CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TFGRWLALALEFQLGADVLATTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDEDETELSNSN CCCHHHHCCCCC >Mature Secondary Structure MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRL CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH TFGRWLALALEFQLGADVLATTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDEDETELSNSN CCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA