Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

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The map label for this gene is 158340612

Identifier: 158340612

GI number: 158340612

Start: 128481

End: 128879

Strand: Reverse

Name: 158340612

Synonym: AM1_C0164

Alternate gene names: NA

Gene position: 128879-128481 (Counterclockwise)

Preceding gene: 158340614

Following gene: 158340611

Centisome position: 47.19

GC content: 46.62

Gene sequence:

>399_bases
ATGGAATTCGTCCACCATTTCCAAGGCAACTTGGAAATCATCGTATCTTTTTTAGAAGTAGTACTGGAAGCAGTAGCGGC
TTTTTGTATTGTGTTGGGCCTGCTCGTGAGCATCAAGCTCTCGGTTGTTTTGCGCCGTCGTCGCTCAACCATACAGTTCC
CATTGGGACGATTGCGGTTAACTTTTGGACGATGGTTAGCATTAGCTCTGGAGTTTCAATTGGGGGCAGATGTCTTAGCC
ACGACCGTTGCTCCTACGTTTGAGGCACTCGGGAAACTGGGTGCCATCGCAATCATTCGTACCTTTCTCAACTACTTTCT
GAACAAAGAACTGATCGAGGTCTTTGAGATGCAAAAGCGCTTTGATGAGGACGAGACGGAATTATCCAACTCCAATTAA

Upstream 100 bases:

>100_bases
GCCTTTGAGTTGTCAATCCTCCTGCAAGATTAACTCAATAAAGGTACACAACAGGGTAGTCTCTTTGGCAGGGTGTTGTG
CTGGTCAAGGTTGAAGCTTG

Downstream 100 bases:

>100_bases
CCAGACCTGGATGTGAGTTGGATAATTCTAGTTGAGTGAGGATGGTTTAGCATCTTCACTTCTGCTTAGCCCTCTTTTAT
CACTTTGGTAGAAGAGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRLTFGRWLALALEFQLGADVLA
TTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKRFDEDETELSNSN

Sequences:

>Translated_132_residues
MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRLTFGRWLALALEFQLGADVLA
TTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKRFDEDETELSNSN
>Mature_132_residues
MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRLTFGRWLALALEFQLGADVLA
TTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKRFDEDETELSNSN

Specific function: Unknown

COG id: COG4828

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14973; Mature: 14973

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRL
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TFGRWLALALEFQLGADVLATTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDEDETELSNSN
CCCHHHHCCCCC
>Mature Secondary Structure
MEFVHHFQGNLEIIVSFLEVVLEAVAAFCIVLGLLVSIKLSVVLRRRRSTIQFPLGRLRL
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TFGRWLALALEFQLGADVLATTVAPTFEALGKLGAIAIIRTFLNYFLNKELIEVFEMQKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDEDETELSNSN
CCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA