Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340609
Identifier: 158340609
GI number: 158340609
Start: 125987
End: 126400
Strand: Direct
Name: 158340609
Synonym: AM1_C0159
Alternate gene names: NA
Gene position: 125987-126400 (Clockwise)
Preceding gene: 158340608
Following gene: 158340613
Centisome position: 46.13
GC content: 48.07
Gene sequence:
>414_bases ATGACTCAGATTCCATCCCTGACTCACCAACAGCTAGAGCTGCTGAGAATAGCCAAGAAGAATACTGTGGCCGAATTACG GCTTTCCTATGAGTTTCCAGTGCTCGATGACAATGAACCCCCAATCGGCCATCCACCGTTCATCCAAGAATTGATTGATC ACCATTTCATCCAGGTGCAAGTCAAAGAAACTTCCCTGCGTGCTTCCGAGTTTCAGCAAGAAAATTGGATGGAGTACTGT GATGGGATTGACTATCCTCACCAAGCCGATTGGGACCGATGGCGGCAGGGATTCATCGCTCAATTAAGTGAAGGGATTGA GAGCCTGATGATTCCAGGGAAAAATCTAAGGCAATTTACGCAGGTTTGGATCCGAGAGATTAGTCTACGAGCGGTTCAGC CGAGTAGTCCGTGA
Upstream 100 bases:
>100_bases GCGGTGGAAGAAACTCACTAGGGCTTAAGACTTTGAGTAGAAGTTGAGTGTTGGTAAACCCCGAATCAATACACTTGGAC AAGACAAGTGAGATTCAACC
Downstream 100 bases:
>100_bases GTGGGGTTTGTGGCTGGGATTTAATTAAACCTAATTAAAGGCTGGAGTTGAAATTCAATGAGCGATAGATGTCACTACGT CTTTGGTTCAATAGCCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTQIPSLTHQQLELLRIAKKNTVAELRLSYEFPVLDDNEPPIGHPPFIQELIDHHFIQVQVKETSLRASEFQQENWMEYC DGIDYPHQADWDRWRQGFIAQLSEGIESLMIPGKNLRQFTQVWIREISLRAVQPSSP
Sequences:
>Translated_137_residues MTQIPSLTHQQLELLRIAKKNTVAELRLSYEFPVLDDNEPPIGHPPFIQELIDHHFIQVQVKETSLRASEFQQENWMEYC DGIDYPHQADWDRWRQGFIAQLSEGIESLMIPGKNLRQFTQVWIREISLRAVQPSSP >Mature_136_residues TQIPSLTHQQLELLRIAKKNTVAELRLSYEFPVLDDNEPPIGHPPFIQELIDHHFIQVQVKETSLRASEFQQENWMEYCD GIDYPHQADWDRWRQGFIAQLSEGIESLMIPGKNLRQFTQVWIREISLRAVQPSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16081; Mature: 15950
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIPSLTHQQLELLRIAKKNTVAELRLSYEFPVLDDNEPPIGHPPFIQELIDHHFIQVQ CCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEE VKETSLRASEFQQENWMEYCDGIDYPHQADWDRWRQGFIAQLSEGIESLMIPGKNLRQFT EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QVWIREISLRAVQPSSP HHHHHHHHHHCCCCCCC >Mature Secondary Structure TQIPSLTHQQLELLRIAKKNTVAELRLSYEFPVLDDNEPPIGHPPFIQELIDHHFIQVQ CCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEE VKETSLRASEFQQENWMEYCDGIDYPHQADWDRWRQGFIAQLSEGIESLMIPGKNLRQFT EHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH QVWIREISLRAVQPSSP HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA