Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340602
Identifier: 158340602
GI number: 158340602
Start: 122539
End: 122775
Strand: Direct
Name: 158340602
Synonym: AM1_C0150
Alternate gene names: NA
Gene position: 122539-122775 (Clockwise)
Preceding gene: 158340599
Following gene: 158340606
Centisome position: 44.87
GC content: 49.79
Gene sequence:
>237_bases ATGTTCTCGGCAATCTCATTGGCTAGAGTCACCATCATTCGTTGTTGTGTGGTGAGTCCTGACGAGAAAGCCTCTAAGAC CGCTTCAGCGGCAGGGACCGAAGGACTGATGATCGAGAGTAGTGCCGACGTAATTGGACTGCCTCTCGACAAAGTTGATG TAGATATACCCAATAAGCCGAGAGCCATAGAAGACATTGAGCTTTCGGTTGTTGTCAGCAGTGGGCCTAGTCCATAG
Upstream 100 bases:
>100_bases CGGGCTGGGATTGATTTGCACGGGTTGATTTTGTAAGGGTAATATTCATCGTGATTTCTCCAAATCTGGAGCAGGTTGGA ATCAGCTAGTAATGAGGGTC
Downstream 100 bases:
>100_bases ATCTGTAAATAGTTCATCAGTTATCCATGCGGCGTGAATCCCTTAAATTGCCACTGGAAAGGTTTGGCCATAGTGTGATT GAAATATTCAATAAAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MFSAISLARVTIIRCCVVSPDEKASKTASAAGTEGLMIESSADVIGLPLDKVDVDIPNKPRAIEDIELSVVVSSGPSP
Sequences:
>Translated_78_residues MFSAISLARVTIIRCCVVSPDEKASKTASAAGTEGLMIESSADVIGLPLDKVDVDIPNKPRAIEDIELSVVVSSGPSP >Mature_78_residues MFSAISLARVTIIRCCVVSPDEKASKTASAAGTEGLMIESSADVIGLPLDKVDVDIPNKPRAIEDIELSVVVSSGPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8069; Mature: 8069
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSAISLARVTIIRCCVVSPDEKASKTASAAGTEGLMIESSADVIGLPLDKVDVDIPNKP CCCCHHHHHEEEEEHEECCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCEEECCCCCC RAIEDIELSVVVSSGPSP CCCCCEEEEEEECCCCCC >Mature Secondary Structure MFSAISLARVTIIRCCVVSPDEKASKTASAAGTEGLMIESSADVIGLPLDKVDVDIPNKP CCCCHHHHHEEEEEHEECCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCEEECCCCCC RAIEDIELSVVVSSGPSP CCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA