Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340600
Identifier: 158340600
GI number: 158340600
Start: 121712
End: 122089
Strand: Reverse
Name: 158340600
Synonym: AM1_C0148
Alternate gene names: NA
Gene position: 122089-121712 (Counterclockwise)
Preceding gene: 158340601
Following gene: 158340597
Centisome position: 44.7
GC content: 49.74
Gene sequence:
>378_bases ATGCCAATGATCCGGGCACGATATCCCGAAAACTGGGATGAGATTGCATTGCAAGTCAAGGAAGACGCCAACTGGTGTTG TACTCAGTGCGGTAAACCCTGTCGAAAACCGGGGGTTGAGCGGCTGCACTTCGCTTTCTGTCTGATGATTACGTACCCTG AATGGTTCCCGATCACTTCAGAGGGGGAAGAAGAAAAACCTCAGCGATTCACTCTCACGGTGGCCCACCTTGACCAAGAT CCACAGAACAATCACCCAGATAATCTCAATGCTCTCTGTGCGCCCTGCCACTTGAAATTTGATGCGCTGTTCCGAAAAGC CAATGCGTCCACAAAACAGGAATGGTTTGGACAGATGAAATTGGAGGATTTGCCATGA
Upstream 100 bases:
>100_bases CCATTTTCATCACTTCTGACCATGATCCGGGTCGTTGCATTAAATCCTATCTCGAATGGAAGTATCCAGCCCCAAAGCAA CAAACATTGGAGGTTCTGTA
Downstream 100 bases:
>100_bases ATAAACAAAAGTGGAACTCCATTCAAAGTGGTCGAGTTATCTTGCGTCTAAAGGCACTCGGGTGTCTGAGTAATCACAGT CAGTCCATTCGTTCTGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPMIRARYPENWDEIALQVKEDANWCCTQCGKPCRKPGVERLHFAFCLMITYPEWFPITSEGEEEKPQRFTLTVAHLDQD PQNNHPDNLNALCAPCHLKFDALFRKANASTKQEWFGQMKLEDLP
Sequences:
>Translated_125_residues MPMIRARYPENWDEIALQVKEDANWCCTQCGKPCRKPGVERLHFAFCLMITYPEWFPITSEGEEEKPQRFTLTVAHLDQD PQNNHPDNLNALCAPCHLKFDALFRKANASTKQEWFGQMKLEDLP >Mature_124_residues PMIRARYPENWDEIALQVKEDANWCCTQCGKPCRKPGVERLHFAFCLMITYPEWFPITSEGEEEKPQRFTLTVAHLDQDP QNNHPDNLNALCAPCHLKFDALFRKANASTKQEWFGQMKLEDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14582; Mature: 14451
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMIRARYPENWDEIALQVKEDANWCCTQCGKPCRKPGVERLHFAFCLMITYPEWFPITS CCCCCCCCCCCHHHEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC EGEEEKPQRFTLTVAHLDQDPQNNHPDNLNALCAPCHLKFDALFRKANASTKQEWFGQMK CCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHHCCCC LEDLP CCCCC >Mature Secondary Structure PMIRARYPENWDEIALQVKEDANWCCTQCGKPCRKPGVERLHFAFCLMITYPEWFPITS CCCCCCCCCCHHHEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC EGEEEKPQRFTLTVAHLDQDPQNNHPDNLNALCAPCHLKFDALFRKANASTKQEWFGQMK CCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCHHHHHHCCCC LEDLP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA