Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340587
Identifier: 158340587
GI number: 158340587
Start: 114731
End: 115426
Strand: Reverse
Name: 158340587
Synonym: AM1_C0135
Alternate gene names: NA
Gene position: 115426-114731 (Counterclockwise)
Preceding gene: 158340588
Following gene: 158340585
Centisome position: 42.26
GC content: 48.28
Gene sequence:
>696_bases TTGCCCACCCCGGAGGCTGTAGACCAGACTGCCTGGTTTGTCGAAGTTCAGTTTCAACGTGACCCGGTTTTCTATCAGCG TTTCTTTTCGGAGATTTATCTGTATCTGAATCTGCATCCCAACACCATCGATTGGCAAGCCGTTGTTATCTACCCCAAAC GCAGTATTGAGACGGACTATCCCCATGTGTACCGGGCCAATCTGAATAGCTATCAGGTGCATCGCGTTTACTTGGAAGAC TTGGATGAATCCGTTGACTCTCTTGGCGTGGGACTGATGCAGTTGATTGTGGCTGATTCAGGAGATACCGCCACCCAGGC TCAAGCTTTGCTTTCAAGGGTTCAGCCTCAAGAACAGACAAATCCAAGATTTGCGGCGATAATGGAGTTAATTGAAACAA TTGTGGTCTATAAATTTCCACAATTGAGCCGAGAAGAGATAGAGAGCATGTTGGGCTTAAGCGAACTCAAGCAAACTAAG GTATACCAGGAAGCCTTGGACGAAGGCCGTCAGGAAGAGGGGCAATCTCTTATTCTTCGCCTACTCACCCGTCGTATTGG TGACGTTGCTCCTGAGTTGAGATCGCAGATCCGAGCTCTATCCCTAGTTCAGATTGAAGCTTTGGGTGAGGCATTGCCCG ACTTTAAGCAACCTGCTGATCTAGTGAACTGGTTGCAGGATCACCGATCTGAGTAA
Upstream 100 bases:
>100_bases ATAACTATTCAATTAAATTTACGACAGTCAGCTCAAAATTCAGATCGCCATTCCCCATAGAATATCCATCAACTCAATTG CATGCCTTGATGGAGTGTTC
Downstream 100 bases:
>100_bases CAAGGGACTACTTCTCAAAGCAAGCTTAGGCAGGGCTTTCAGGTCAGGCGATTATTTTCTAAGGACTCAGCATGTTAAAA TCAGCGGGAGTAACCCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPTPEAVDQTAWFVEVQFQRDPVFYQRFFSEIYLYLNLHPNTIDWQAVVIYPKRSIETDYPHVYRANLNSYQVHRVYLED LDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTK VYQEALDEGRQEEGQSLILRLLTRRIGDVAPELRSQIRALSLVQIEALGEALPDFKQPADLVNWLQDHRSE
Sequences:
>Translated_231_residues MPTPEAVDQTAWFVEVQFQRDPVFYQRFFSEIYLYLNLHPNTIDWQAVVIYPKRSIETDYPHVYRANLNSYQVHRVYLED LDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTK VYQEALDEGRQEEGQSLILRLLTRRIGDVAPELRSQIRALSLVQIEALGEALPDFKQPADLVNWLQDHRSE >Mature_230_residues PTPEAVDQTAWFVEVQFQRDPVFYQRFFSEIYLYLNLHPNTIDWQAVVIYPKRSIETDYPHVYRANLNSYQVHRVYLEDL DESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQTNPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKV YQEALDEGRQEEGQSLILRLLTRRIGDVAPELRSQIRALSLVQIEALGEALPDFKQPADLVNWLQDHRSE
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26654; Mature: 26522
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPEAVDQTAWFVEVQFQRDPVFYQRFFSEIYLYLNLHPNTIDWQAVVIYPKRSIETDY CCCCHHHCCCEEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCC PHVYRANLNSYQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQT CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC NPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILR CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTRRIGDVAPELRSQIRALSLVQIEALGEALPDFKQPADLVNWLQDHRSE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PTPEAVDQTAWFVEVQFQRDPVFYQRFFSEIYLYLNLHPNTIDWQAVVIYPKRSIETDY CCCHHHCCCEEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCC PHVYRANLNSYQVHRVYLEDLDESVDSLGVGLMQLIVADSGDTATQAQALLSRVQPQEQT CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC NPRFAAIMELIETIVVYKFPQLSREEIESMLGLSELKQTKVYQEALDEGRQEEGQSLILR CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTRRIGDVAPELRSQIRALSLVQIEALGEALPDFKQPADLVNWLQDHRSE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA