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The map label for this gene is xerC [H]

Identifier: 158340586

GI number: 158340586

Start: 113478

End: 114524

Strand: Direct

Name: xerC [H]

Synonym: AM1_C0134

Alternate gene names: 158340586

Gene position: 113478-114524 (Clockwise)

Preceding gene: 158340579

Following gene: 158340590

Centisome position: 41.55

GC content: 49.67

Gene sequence:

>1047_bases
ATGGAAGCATCAGGGTTAGTTCGCTTAGAAATCGATGAGTCGGCAGTTGATGTCGATTTGCTTAGAGCAGTCTTGGTGGA
GAAAACCAAACCCTCCACGCGGGAAGGGTATACCAAGGATCTGGTGGACTTCTTTTTATTCGTGACCCAAGGGGAAATGG
TCTATGGAGTTGAGGGACCGAAGCGAAAAAGTGAGATAAAGGCGCAGGTGAAGAGGGAATTATCTAGGCTGAGTCAATCC
TTTGTGGGGATTGGCAGACTGAAGGCTTTAGAATTAGCCGCTCGGTATCGAGAATGCATGATGCAGCGAGGGTTACAAGC
GAATACTATCAATCGGCGGTTGTCCGCAGTGAAGTCCATGGTGCGGATGGCCCGTCGTTTAGAGATGTGTGATTGGACTT
TGACGGAAGTTGATGGTTTAACGGTGAAACCTTATCGAGATACCAGAGGAATTACAGCCTCTAAATTTCGACTGATGATG
GTATTCATCAATCGGTTTTCCCTAGCTGGGGCTCGGGATTTCGCCATGATGACGCTACTCTGGGAGGCGGGATTGCGACG
GTCTGAGCTGGTGGGCTGTGATGTCCGTCATTTTGACTCGGAGCAGAAACGGTTGTCGATTTTAGGGAAAGGAAGGAACG
AAAGGGAGTGGATTGATTTGACGGAAAGTGGGGTACTAGCGATTTCAGAGTGGCTGAAACTACGAGAAGTTTATGCCCTC
ACGGAGCCGTTGTTTATCTCGTTGGATCGGGCGAATTGGGGGTCGCGGTTGTCAGGGACATCGGTATATCGAATTGTCCG
GGCTCTAGCGAAGAAGGCTGGGGTGAGCGAGAACTTTGGGCCTCATAAGGTACGCCATAGTGGCACAACGACTTATTTGG
AAATGACGGGTGGAGATTTGCGCGGAGCACAAGCTTATTCCCGACACGCCAATCTCAATACGCTCAAGTTCTATGATGAC
AATCGCAAGCAGCTTCAGAAGAAGGCGTCTGCGAAGTTGGCAGAGACGATCTCTTGGAATGAGGCATCAAGTGAGTCGTC
AGATTAA

Upstream 100 bases:

>100_bases
AAGTTTAGTCAAAGTCCAAATAATGATTCATTGGGTTATGTGTACGGAAATTGCCATTGACGTACACTAAAATGGACGTG
GATTCAGATCGGCGATCGCA

Downstream 100 bases:

>100_bases
GGCTGCTGCAACCAGTTCAGTCGTGAAGAGTTAATCACTATCTCCACTTAAATGCGCTGGGATCTATATTTGCCAGTAGA
TTTAGAGGATTTTGCCGGTG

Product: tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MEASGLVRLEIDESAVDVDLLRAVLVEKTKPSTREGYTKDLVDFFLFVTQGEMVYGVEGPKRKSEIKAQVKRELSRLSQS
FVGIGRLKALELAARYRECMMQRGLQANTINRRLSAVKSMVRMARRLEMCDWTLTEVDGLTVKPYRDTRGITASKFRLMM
VFINRFSLAGARDFAMMTLLWEAGLRRSELVGCDVRHFDSEQKRLSILGKGRNEREWIDLTESGVLAISEWLKLREVYAL
TEPLFISLDRANWGSRLSGTSVYRIVRALAKKAGVSENFGPHKVRHSGTTTYLEMTGGDLRGAQAYSRHANLNTLKFYDD
NRKQLQKKASAKLAETISWNEASSESSD

Sequences:

>Translated_348_residues
MEASGLVRLEIDESAVDVDLLRAVLVEKTKPSTREGYTKDLVDFFLFVTQGEMVYGVEGPKRKSEIKAQVKRELSRLSQS
FVGIGRLKALELAARYRECMMQRGLQANTINRRLSAVKSMVRMARRLEMCDWTLTEVDGLTVKPYRDTRGITASKFRLMM
VFINRFSLAGARDFAMMTLLWEAGLRRSELVGCDVRHFDSEQKRLSILGKGRNEREWIDLTESGVLAISEWLKLREVYAL
TEPLFISLDRANWGSRLSGTSVYRIVRALAKKAGVSENFGPHKVRHSGTTTYLEMTGGDLRGAQAYSRHANLNTLKFYDD
NRKQLQKKASAKLAETISWNEASSESSD
>Mature_348_residues
MEASGLVRLEIDESAVDVDLLRAVLVEKTKPSTREGYTKDLVDFFLFVTQGEMVYGVEGPKRKSEIKAQVKRELSRLSQS
FVGIGRLKALELAARYRECMMQRGLQANTINRRLSAVKSMVRMARRLEMCDWTLTEVDGLTVKPYRDTRGITASKFRLMM
VFINRFSLAGARDFAMMTLLWEAGLRRSELVGCDVRHFDSEQKRLSILGKGRNEREWIDLTESGVLAISEWLKLREVYAL
TEPLFISLDRANWGSRLSGTSVYRIVRALAKKAGVSENFGPHKVRHSGTTTYLEMTGGDLRGAQAYSRHANLNTLKFYDD
NRKQLQKKASAKLAETISWNEASSESSD

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=232, Percent_Identity=33.1896551724138, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 39482; Mature: 39482

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASGLVRLEIDESAVDVDLLRAVLVEKTKPSTREGYTKDLVDFFLFVTQGEMVYGVEGP
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
KRKSEIKAQVKRELSRLSQSFVGIGRLKALELAARYRECMMQRGLQANTINRRLSAVKSM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VRMARRLEMCDWTLTEVDGLTVKPYRDTRGITASKFRLMMVFINRFSLAGARDFAMMTLL
HHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WEAGLRRSELVGCDVRHFDSEQKRLSILGKGRNEREWIDLTESGVLAISEWLKLREVYAL
HHHCCCHHHHCCCCHHHCCCHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHH
TEPLFISLDRANWGSRLSGTSVYRIVRALAKKAGVSENFGPHKVRHSGTTTYLEMTGGDL
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCC
RGAQAYSRHANLNTLKFYDDNRKQLQKKASAKLAETISWNEASSESSD
CCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEASGLVRLEIDESAVDVDLLRAVLVEKTKPSTREGYTKDLVDFFLFVTQGEMVYGVEGP
CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCC
KRKSEIKAQVKRELSRLSQSFVGIGRLKALELAARYRECMMQRGLQANTINRRLSAVKSM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VRMARRLEMCDWTLTEVDGLTVKPYRDTRGITASKFRLMMVFINRFSLAGARDFAMMTLL
HHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WEAGLRRSELVGCDVRHFDSEQKRLSILGKGRNEREWIDLTESGVLAISEWLKLREVYAL
HHHCCCHHHHCCCCHHHCCCHHHHHHHHCCCCCCCHHEEECCCCHHHHHHHHHHHHHHHH
TEPLFISLDRANWGSRLSGTSVYRIVRALAKKAGVSENFGPHKVRHSGTTTYLEMTGGDL
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCC
RGAQAYSRHANLNTLKFYDDNRKQLQKKASAKLAETISWNEASSESSD
CCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]