Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340583
Identifier: 158340583
GI number: 158340583
Start: 112410
End: 112889
Strand: Reverse
Name: 158340583
Synonym: AM1_C0131
Alternate gene names: NA
Gene position: 112889-112410 (Counterclockwise)
Preceding gene: 158340584
Following gene: 158340582
Centisome position: 41.33
GC content: 52.08
Gene sequence:
>480_bases ATGGCCCGTGCGATCGCAGAAAAATGCCGTCGATGTTCCAAGCTACCCGTGGACCAAGCAAAGTTAAAGGAGTGCTGGGT GGGCCAGCGTTGCCATGTGCGACGTTCCTCGTATAAACACCGCGATCGCTATAACCGAAATAAGAAACGGAAATATCAAC TACAGACGGGGAAGCTGATTCCTGAAGTTACGGTGGAAGTCCCCGTCAAACCTGCGGCTATTCGACGGATGTATCGAGCG AGAAGGGATGCGCCCCTTCATGCCATGTCAGCGGAGCTGTGGATAGGCCAAAAGCGGGTTGCGATCGTTGAGCCTGTCCA TACCCTGGGGTGGACTAACTCTGATGTGACGAAATACTCCAGGAATATACTCAACCGCTTCTCTGAGCATTTAGACGGAA AAGTACTGCATCAGTTTGATACGCAAGTCGAAGTGGATCCAAGTCAATGCCCGATTCGTCCCTGCCCTTTGTTCCCGTAG
Upstream 100 bases:
>100_bases GCTAAACATGGGCAGGAAGCCATAGAATCCTTGATGGAATTCTACGAAGCGGAAGGCTGGACTTTGCCTGCCCCTCAAAT GATGCAAATGGTTTAGGACG
Downstream 100 bases:
>100_bases GAGGTTGTTCACGATGGCATTGCAACTGGAACTCGATCTTTGGCAGCAGTTGAATCAAGCGGAAGCGGTTCCAGTGGAGA GTGACCTCCAGCAGTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLIPEVTVEVPVKPAAIRRMYRA RRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYSRNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP
Sequences:
>Translated_159_residues MARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLIPEVTVEVPVKPAAIRRMYRA RRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYSRNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP >Mature_158_residues ARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLIPEVTVEVPVKPAAIRRMYRAR RDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYSRNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18601; Mature: 18470
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLI CCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCCC PEVTVEVPVKPAAIRRMYRARRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYS CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHCCCCCHHHHHH RNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP HHHHHHHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure ARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLI CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCCC PEVTVEVPVKPAAIRRMYRARRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYS CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHCCCCCHHHHHH RNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP HHHHHHHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA