Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340583

Identifier: 158340583

GI number: 158340583

Start: 112410

End: 112889

Strand: Reverse

Name: 158340583

Synonym: AM1_C0131

Alternate gene names: NA

Gene position: 112889-112410 (Counterclockwise)

Preceding gene: 158340584

Following gene: 158340582

Centisome position: 41.33

GC content: 52.08

Gene sequence:

>480_bases
ATGGCCCGTGCGATCGCAGAAAAATGCCGTCGATGTTCCAAGCTACCCGTGGACCAAGCAAAGTTAAAGGAGTGCTGGGT
GGGCCAGCGTTGCCATGTGCGACGTTCCTCGTATAAACACCGCGATCGCTATAACCGAAATAAGAAACGGAAATATCAAC
TACAGACGGGGAAGCTGATTCCTGAAGTTACGGTGGAAGTCCCCGTCAAACCTGCGGCTATTCGACGGATGTATCGAGCG
AGAAGGGATGCGCCCCTTCATGCCATGTCAGCGGAGCTGTGGATAGGCCAAAAGCGGGTTGCGATCGTTGAGCCTGTCCA
TACCCTGGGGTGGACTAACTCTGATGTGACGAAATACTCCAGGAATATACTCAACCGCTTCTCTGAGCATTTAGACGGAA
AAGTACTGCATCAGTTTGATACGCAAGTCGAAGTGGATCCAAGTCAATGCCCGATTCGTCCCTGCCCTTTGTTCCCGTAG

Upstream 100 bases:

>100_bases
GCTAAACATGGGCAGGAAGCCATAGAATCCTTGATGGAATTCTACGAAGCGGAAGGCTGGACTTTGCCTGCCCCTCAAAT
GATGCAAATGGTTTAGGACG

Downstream 100 bases:

>100_bases
GAGGTTGTTCACGATGGCATTGCAACTGGAACTCGATCTTTGGCAGCAGTTGAATCAAGCGGAAGCGGTTCCAGTGGAGA
GTGACCTCCAGCAGTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLIPEVTVEVPVKPAAIRRMYRA
RRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYSRNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP

Sequences:

>Translated_159_residues
MARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLIPEVTVEVPVKPAAIRRMYRA
RRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYSRNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP
>Mature_158_residues
ARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLIPEVTVEVPVKPAAIRRMYRAR
RDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYSRNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18601; Mature: 18470

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLI
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCCC
PEVTVEVPVKPAAIRRMYRARRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYS
CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHCCCCCHHHHHH
RNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP
HHHHHHHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ARAIAEKCRRCSKLPVDQAKLKECWVGQRCHVRRSSYKHRDRYNRNKKRKYQLQTGKLI
CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCCC
PEVTVEVPVKPAAIRRMYRARRDAPLHAMSAELWIGQKRVAIVEPVHTLGWTNSDVTKYS
CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHCCCCCHHHHHH
RNILNRFSEHLDGKVLHQFDTQVEVDPSQCPIRPCPLFP
HHHHHHHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA