Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340582

Identifier: 158340582

GI number: 158340582

Start: 111731

End: 112396

Strand: Reverse

Name: 158340582

Synonym: AM1_C0130

Alternate gene names: NA

Gene position: 112396-111731 (Counterclockwise)

Preceding gene: 158340583

Following gene: 158340581

Centisome position: 41.15

GC content: 51.2

Gene sequence:

>666_bases
ATGGCATTGCAACTGGAACTCGATCTTTGGCAGCAGTTGAATCAAGCGGAAGCGGTTCCAGTGGAGAGTGACCTCCAGCA
GTTGCAGGAGCGATTGGACTTAGTGATAGCCCAGTTGCCATTAGAGGAGAAGTTATCCACGGCGGGGACTGCCCTTTTGC
AGATGGCGGAAATCTTGAGTCGGCGAGCGGAGGTCTTCCTCAGGGACTGGCGAGATGCCCACAACGATGACGGTCCCATC
CTTGATTGGGATGACGAAATAGGGATGGTTCGGCAATCCATGGTGTTAGACGATGATCTAATTGCTGAACCCGACCCGGT
GACTCGGCGAACATTACCCAAAGAGGAGTGTGAGTCGATCGTTGTGCTCAAGGACAAGGCATCGTTGCTGGGAGAGCTGG
AGACTGAGTTAAGGGTTGAGCAACCTGATGAAGTCTTGCAAGTCTTGGAAGAAGAGGATGTTTTGGCATGGGTACATGCC
ATCTCAACGTACTTACAGGGGACATCTGGGATGGTGCCTTTGGTCGAGCTAAAGCAGGAGCTACAGCTGTCAATTGTTCC
TATCTGGCTAGGAATGCTACTCGGTGGATTTCAGTTTGAGCAGCGGGGTGGGTTTTACGATCTGAATGTCTGGATTGAAG
CAAAAATCTCTAGCAGCAAACCTTGA

Upstream 100 bases:

>100_bases
GACGGAAAAGTACTGCATCAGTTTGATACGCAAGTCGAAGTGGATCCAAGTCAATGCCCGATTCGTCCCTGCCCTTTGTT
CCCGTAGGAGGTTGTTCACG

Downstream 100 bases:

>100_bases
AGTCAATCATTCTTCATTTTTTGTACTTATTAGAGGTTCGTTAGCCAGTATCAGACTTGGCATTGTTCAACGCCCAATCG
TTTAGGAGAATACTTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILSRRAEVFLRDWRDAHNDDGPI
LDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESIVVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHA
ISTYLQGTSGMVPLVELKQELQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP

Sequences:

>Translated_221_residues
MALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILSRRAEVFLRDWRDAHNDDGPI
LDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESIVVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHA
ISTYLQGTSGMVPLVELKQELQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP
>Mature_220_residues
ALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILSRRAEVFLRDWRDAHNDDGPIL
DWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESIVVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHAI
STYLQGTSGMVPLVELKQELQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25057; Mature: 24926

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILS
CEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RRAEVFLRDWRDAHNDDGPILDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESI
HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCHHCCCCCCCHHCCCCHHHHCEE
VVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHAISTYLQGTSGMVPLVELKQE
EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCC
>Mature Secondary Structure 
ALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILS
EEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RRAEVFLRDWRDAHNDDGPILDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESI
HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCHHCCCCCCCHHCCCCHHHHCEE
VVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHAISTYLQGTSGMVPLVELKQE
EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA