Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340582
Identifier: 158340582
GI number: 158340582
Start: 111731
End: 112396
Strand: Reverse
Name: 158340582
Synonym: AM1_C0130
Alternate gene names: NA
Gene position: 112396-111731 (Counterclockwise)
Preceding gene: 158340583
Following gene: 158340581
Centisome position: 41.15
GC content: 51.2
Gene sequence:
>666_bases ATGGCATTGCAACTGGAACTCGATCTTTGGCAGCAGTTGAATCAAGCGGAAGCGGTTCCAGTGGAGAGTGACCTCCAGCA GTTGCAGGAGCGATTGGACTTAGTGATAGCCCAGTTGCCATTAGAGGAGAAGTTATCCACGGCGGGGACTGCCCTTTTGC AGATGGCGGAAATCTTGAGTCGGCGAGCGGAGGTCTTCCTCAGGGACTGGCGAGATGCCCACAACGATGACGGTCCCATC CTTGATTGGGATGACGAAATAGGGATGGTTCGGCAATCCATGGTGTTAGACGATGATCTAATTGCTGAACCCGACCCGGT GACTCGGCGAACATTACCCAAAGAGGAGTGTGAGTCGATCGTTGTGCTCAAGGACAAGGCATCGTTGCTGGGAGAGCTGG AGACTGAGTTAAGGGTTGAGCAACCTGATGAAGTCTTGCAAGTCTTGGAAGAAGAGGATGTTTTGGCATGGGTACATGCC ATCTCAACGTACTTACAGGGGACATCTGGGATGGTGCCTTTGGTCGAGCTAAAGCAGGAGCTACAGCTGTCAATTGTTCC TATCTGGCTAGGAATGCTACTCGGTGGATTTCAGTTTGAGCAGCGGGGTGGGTTTTACGATCTGAATGTCTGGATTGAAG CAAAAATCTCTAGCAGCAAACCTTGA
Upstream 100 bases:
>100_bases GACGGAAAAGTACTGCATCAGTTTGATACGCAAGTCGAAGTGGATCCAAGTCAATGCCCGATTCGTCCCTGCCCTTTGTT CCCGTAGGAGGTTGTTCACG
Downstream 100 bases:
>100_bases AGTCAATCATTCTTCATTTTTTGTACTTATTAGAGGTTCGTTAGCCAGTATCAGACTTGGCATTGTTCAACGCCCAATCG TTTAGGAGAATACTTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILSRRAEVFLRDWRDAHNDDGPI LDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESIVVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHA ISTYLQGTSGMVPLVELKQELQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP
Sequences:
>Translated_221_residues MALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILSRRAEVFLRDWRDAHNDDGPI LDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESIVVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHA ISTYLQGTSGMVPLVELKQELQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP >Mature_220_residues ALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILSRRAEVFLRDWRDAHNDDGPIL DWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESIVVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHAI STYLQGTSGMVPLVELKQELQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25057; Mature: 24926
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILS CEEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RRAEVFLRDWRDAHNDDGPILDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESI HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCHHCCCCCCCHHCCCCHHHHCEE VVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHAISTYLQGTSGMVPLVELKQE EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCC >Mature Secondary Structure ALQLELDLWQQLNQAEAVPVESDLQQLQERLDLVIAQLPLEEKLSTAGTALLQMAEILS EEEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RRAEVFLRDWRDAHNDDGPILDWDDEIGMVRQSMVLDDDLIAEPDPVTRRTLPKEECESI HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCCHHCCCCCCCHHCCCCHHHHCEE VVLKDKASLLGELETELRVEQPDEVLQVLEEEDVLAWVHAISTYLQGTSGMVPLVELKQE EEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LQLSIVPIWLGMLLGGFQFEQRGGFYDLNVWIEAKISSSKP HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA