Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340573
Identifier: 158340573
GI number: 158340573
Start: 106701
End: 107144
Strand: Direct
Name: 158340573
Synonym: AM1_C0121
Alternate gene names: NA
Gene position: 106701-107144 (Clockwise)
Preceding gene: 158340572
Following gene: 158340576
Centisome position: 39.07
GC content: 34.68
Gene sequence:
>444_bases ATGAGTTGGAGTCTAGTACAACAAAAACGCTTGCTAAAAGAAAGAGAGATATTATCACAGTACTTTAAAGCATTTGAATG GGTTAACCCAACAGATAGTTGTAATACATGTATCGAAGGAGATTTATTAACTAATTCAAAAAATAAGTATCAGATCAGAG TTTACGTTCCAAGTGATTATCCAAATTCAAGGCCTGATATGGTTGTGGTCTCTCCTGACCCATTGATAGGTTTCAATGGT AAAAATTTGCTTGATTTTGGAGCAGATATGAAGATGCACACATTGTCACCAAGGAATGGACATGTAAATATATGCCATTA TCGAGATTGGTTACCTAACCTGACTCTTTATCTTGTAGTTCTAAAAGGTAGGATATGGCTAGAGGCATTAGATGCTTATA GGAATTCTGGTTTAGAAATAAGTGAGTATTTACCACACATGTAA
Upstream 100 bases:
>100_bases ACGATGAAAAAATTGAGTTTATTAATTGGGATAGAAGATTATCGCGAGAACTATCTAGACTAATATTTAATTTGAATGGC ATATAGTTAGGGTAACTAAC
Downstream 100 bases:
>100_bases TTACTCCCTTCCCGCCATAAGATTATGGAACAAGTGAAAATATAAAATTCAGGCTGTTTTGAACTTGTTCAGCCGATAGA AACTGGTTAGCAGCAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSWSLVQQKRLLKEREILSQYFKAFEWVNPTDSCNTCIEGDLLTNSKNKYQIRVYVPSDYPNSRPDMVVVSPDPLIGFNG KNLLDFGADMKMHTLSPRNGHVNICHYRDWLPNLTLYLVVLKGRIWLEALDAYRNSGLEISEYLPHM
Sequences:
>Translated_147_residues MSWSLVQQKRLLKEREILSQYFKAFEWVNPTDSCNTCIEGDLLTNSKNKYQIRVYVPSDYPNSRPDMVVVSPDPLIGFNG KNLLDFGADMKMHTLSPRNGHVNICHYRDWLPNLTLYLVVLKGRIWLEALDAYRNSGLEISEYLPHM >Mature_146_residues SWSLVQQKRLLKEREILSQYFKAFEWVNPTDSCNTCIEGDLLTNSKNKYQIRVYVPSDYPNSRPDMVVVSPDPLIGFNGK NLLDFGADMKMHTLSPRNGHVNICHYRDWLPNLTLYLVVLKGRIWLEALDAYRNSGLEISEYLPHM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17108; Mature: 16977
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWSLVQQKRLLKEREILSQYFKAFEWVNPTDSCNTCIEGDLLTNSKNKYQIRVYVPSDY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCC PNSRPDMVVVSPDPLIGFNGKNLLDFGADMKMHTLSPRNGHVNICHYRDWLPNLTLYLVV CCCCCCEEEECCCCEEECCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCHHEEEHH LKGRIWLEALDAYRNSGLEISEYLPHM HHCHHHHHHHHHHHCCCCCHHHHCCCC >Mature Secondary Structure SWSLVQQKRLLKEREILSQYFKAFEWVNPTDSCNTCIEGDLLTNSKNKYQIRVYVPSDY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCC PNSRPDMVVVSPDPLIGFNGKNLLDFGADMKMHTLSPRNGHVNICHYRDWLPNLTLYLVV CCCCCCEEEECCCCEEECCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCHHEEEHH LKGRIWLEALDAYRNSGLEISEYLPHM HHCHHHHHHHHHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA