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The map label for this gene is cpcE [H]

Identifier: 158340570

GI number: 158340570

Start: 103435

End: 104259

Strand: Direct

Name: cpcE [H]

Synonym: AM1_C0118

Alternate gene names: 158340570

Gene position: 103435-104259 (Clockwise)

Preceding gene: 158340569

Following gene: 158340571

Centisome position: 37.87

GC content: 38.42

Gene sequence:

>825_bases
ATGACAAATCGCGAAAATCAACCAGAAGGACAACTTACACCAACCCAGATGATAAAAAATCTTAAAGGGAGCGACTTGGG
ATTAAGAGTTTATGCGGCTTGGTGGTTAGGACGATTCCGAGTTAAAACTTCTGATAGTATCAATGCTTTGATAGGTGCCT
TAGAAGATGAAGATGATAGAACAGATGCAGGTGGATATCCACTTCGACGTAATGCAGCTCGAGCTTTAGGGAAATTGGGT
GACAAAAAAGCTGTTGTACCTCTTATGGAAGCACTAACCTGTACAGATTTTCATGTTCGTGAGGCTGCAGTTCAATCATT
GGGTATGCTGGGAGATCAATCGTGTATCACAAGCCTTGTACAGCTGCTTCAGGACAAAATATCAGGCACAAACCCAGCCC
CAGAACTACCTAATCTTAATCAACCTTACGATTCAATTCTTGAGACGCTAGGTGAGCTTGGAGCATCATCAGAATTACCA
TTAATCAGTTCTTTCTTAAATCATGAGTTGTTACGCATCCAATTCTCTGCAGCTCGTGCAATGTATCAATTGACATCCTC
TGAAATAGATGCAAAGCAGTATGCTGACAGACTAATTGAAGGTTTATCTCATCAAGATTTACAACTTCGAAGATCAGTAC
TACTAGATTTAGGCGCAATAGGATATTTTCCAGCTGCAAAGGCAATCTTTAATACCTATGCGGAAAATAGTCTTAAGTTA
ATTTCTATGAAAGGGTTATTAAAACATGAAATCCAGAATGAAAATAATCCTACTTTGTCTGAAAAATCCGTTATTTTAAT
GGAGTTAATTGACAATCTAATGTAA

Upstream 100 bases:

>100_bases
GAATTATATTAACCTGCAAAAGTACTAGCAGCATGTCACATAAATGAATCTATAAGTTCCTATAGACGCAAGATTGATCT
TTTTTAAATTCAGGTAACCA

Downstream 100 bases:

>100_bases
TAGAGAATACTCTATCTTGGTTATATTGATTGAGAGCACAATTCAAAGATAATATTTATTCTGCTGGTGATACCAATTTC
ATTAAAAGGATGAATACTCA

Product: phycocyanobilin lyase subunit alpha

Products: NA

Alternate protein names: Phycocyanin operon protein CpcE [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTNRENQPEGQLTPTQMIKNLKGSDLGLRVYAAWWLGRFRVKTSDSINALIGALEDEDDRTDAGGYPLRRNAARALGKLG
DKKAVVPLMEALTCTDFHVREAAVQSLGMLGDQSCITSLVQLLQDKISGTNPAPELPNLNQPYDSILETLGELGASSELP
LISSFLNHELLRIQFSAARAMYQLTSSEIDAKQYADRLIEGLSHQDLQLRRSVLLDLGAIGYFPAAKAIFNTYAENSLKL
ISMKGLLKHEIQNENNPTLSEKSVILMELIDNLM

Sequences:

>Translated_274_residues
MTNRENQPEGQLTPTQMIKNLKGSDLGLRVYAAWWLGRFRVKTSDSINALIGALEDEDDRTDAGGYPLRRNAARALGKLG
DKKAVVPLMEALTCTDFHVREAAVQSLGMLGDQSCITSLVQLLQDKISGTNPAPELPNLNQPYDSILETLGELGASSELP
LISSFLNHELLRIQFSAARAMYQLTSSEIDAKQYADRLIEGLSHQDLQLRRSVLLDLGAIGYFPAAKAIFNTYAENSLKL
ISMKGLLKHEIQNENNPTLSEKSVILMELIDNLM
>Mature_273_residues
TNRENQPEGQLTPTQMIKNLKGSDLGLRVYAAWWLGRFRVKTSDSINALIGALEDEDDRTDAGGYPLRRNAARALGKLGD
KKAVVPLMEALTCTDFHVREAAVQSLGMLGDQSCITSLVQLLQDKISGTNPAPELPNLNQPYDSILETLGELGASSELPL
ISSFLNHELLRIQFSAARAMYQLTSSEIDAKQYADRLIEGLSHQDLQLRRSVLLDLGAIGYFPAAKAIFNTYAENSLKLI
SMKGLLKHEIQNENNPTLSEKSVILMELIDNLM

Specific function: Required for the chromophorylation of the CpcA gene product [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: 4.-.-.-

Molecular weight: Translated: 30257; Mature: 30126

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRENQPEGQLTPTQMIKNLKGSDLGLRVYAAWWLGRFRVKTSDSINALIGALEDEDDR
CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCC
TDAGGYPLRRNAARALGKLGDKKAVVPLMEALTCTDFHVREAAVQSLGMLGDQSCITSLV
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QLLQDKISGTNPAPELPNLNQPYDSILETLGELGASSELPLISSFLNHELLRIQFSAARA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHH
MYQLTSSEIDAKQYADRLIEGLSHQDLQLRRSVLLDLGAIGYFPAAKAIFNTYAENSLKL
HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEH
ISMKGLLKHEIQNENNPTLSEKSVILMELIDNLM
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNRENQPEGQLTPTQMIKNLKGSDLGLRVYAAWWLGRFRVKTSDSINALIGALEDEDDR
CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCC
TDAGGYPLRRNAARALGKLGDKKAVVPLMEALTCTDFHVREAAVQSLGMLGDQSCITSLV
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QLLQDKISGTNPAPELPNLNQPYDSILETLGELGASSELPLISSFLNHELLRIQFSAARA
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHH
MYQLTSSEIDAKQYADRLIEGLSHQDLQLRRSVLLDLGAIGYFPAAKAIFNTYAENSLKL
HHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEH
ISMKGLLKHEIQNENNPTLSEKSVILMELIDNLM
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3127591 [H]