Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is 158340567
Identifier: 158340567
GI number: 158340567
Start: 101252
End: 101812
Strand: Direct
Name: 158340567
Synonym: AM1_C0114
Alternate gene names: NA
Gene position: 101252-101812 (Clockwise)
Preceding gene: 158340564
Following gene: 158340569
Centisome position: 37.07
GC content: 33.69
Gene sequence:
>561_bases ATGATACTAGTTGATTGGCAAAAATTGGCAAAAATTAATGAACTTAAAGAGTATTTTGAGGCTGATTTTATTGGTTTTCA GGAGCGAATTGAGTATCATATTCTTGCCTTAGAAAATATTGATGCTAAAGAGCTTGATAAGCTGGCTTTGCTGAGAGTTC TTGAAGTTACTAATGGATGTACCCAGTGGGGATTTAGACGAAAAGATCAATATTGTTTATCGGTAGAGAAAACTCGTGAA TGCATGAATACTGTCATGGGTTTTATTTTGTCAAAAAAAATAGATCTTCCTAGTGGGGAATCAATTTATTTTGCTAAGTC CACTGAACAGTTAATGGATGAAGTACGTGAACTATATCATAATGCTTTTAAGAAACATCATGCTAGATCTGAGAGAGAAT TCTATGCTAGGTCTACAGCAATATTCTTGGTGTGTGGCTATAAGCGATTAGAAGTTGCAATGCAGGTAGTAAATAAAGAA TTTGTATCTTTGTTTACAAAGCATTATCTGGACAAAGGTCAAAAATATATTACTCCCTATATTGAGGCTATCGTTCCTTA A
Upstream 100 bases:
>100_bases AAAAATGAGGTCAATCTATTAAACATTTATTGCAATCAGTAAAAACTCGATATTTATCTTTATGCTACCTTGAAATAATG TTAACTTAAAAGACAATTCG
Downstream 100 bases:
>100_bases ATTAATAGCAGGTAGTATGCGTAAAGTCTTATAGTAATCACTTAGCTTTGCTGTTGCTGTATGGCTGAAATGAAAGAGAA ATCGGTAAAGAGGCTACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MILVDWQKLAKINELKEYFEADFIGFQERIEYHILALENIDAKELDKLALLRVLEVTNGCTQWGFRRKDQYCLSVEKTRE CMNTVMGFILSKKIDLPSGESIYFAKSTEQLMDEVRELYHNAFKKHHARSEREFYARSTAIFLVCGYKRLEVAMQVVNKE FVSLFTKHYLDKGQKYITPYIEAIVP
Sequences:
>Translated_186_residues MILVDWQKLAKINELKEYFEADFIGFQERIEYHILALENIDAKELDKLALLRVLEVTNGCTQWGFRRKDQYCLSVEKTRE CMNTVMGFILSKKIDLPSGESIYFAKSTEQLMDEVRELYHNAFKKHHARSEREFYARSTAIFLVCGYKRLEVAMQVVNKE FVSLFTKHYLDKGQKYITPYIEAIVP >Mature_186_residues MILVDWQKLAKINELKEYFEADFIGFQERIEYHILALENIDAKELDKLALLRVLEVTNGCTQWGFRRKDQYCLSVEKTRE CMNTVMGFILSKKIDLPSGESIYFAKSTEQLMDEVRELYHNAFKKHHARSEREFYARSTAIFLVCGYKRLEVAMQVVNKE FVSLFTKHYLDKGQKYITPYIEAIVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21952; Mature: 21952
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVDWQKLAKINELKEYFEADFIGFQERIEYHILALENIDAKELDKLALLRVLEVTNGC CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCH TQWGFRRKDQYCLSVEKTRECMNTVMGFILSKKIDLPSGESIYFAKSTEQLMDEVRELYH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH NAFKKHHARSEREFYARSTAIFLVCGYKRLEVAMQVVNKEFVSLFTKHYLDKGQKYITPY HHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IEAIVP HHHHCC >Mature Secondary Structure MILVDWQKLAKINELKEYFEADFIGFQERIEYHILALENIDAKELDKLALLRVLEVTNGC CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCH TQWGFRRKDQYCLSVEKTRECMNTVMGFILSKKIDLPSGESIYFAKSTEQLMDEVRELYH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH NAFKKHHARSEREFYARSTAIFLVCGYKRLEVAMQVVNKEFVSLFTKHYLDKGQKYITPY HHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IEAIVP HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA