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The map label for this gene is pbsA1 [H]

Identifier: 158340561

GI number: 158340561

Start: 98498

End: 99214

Strand: Direct

Name: pbsA1 [H]

Synonym: AM1_C0108

Alternate gene names: 158340561

Gene position: 98498-99214 (Clockwise)

Preceding gene: 158340560

Following gene: 158340564

Centisome position: 36.06

GC content: 41.42

Gene sequence:

>717_bases
ATGAGGGAAAAATTATCAATTCAATTGAGTGAAGGCACTAAAAAAGCTCATACAATGGCAGAGAATGTAGGCTTTGTGCG
GTGTTTTCTAAGAGGAGCAGTTGACAAGACATCTTATCGGAACCTCATCGCAAATCTATATTTTGTCTACACTGCGATGG
AGCAGGAACTACGAGTTCTCAAGAAACATCCTATCATTTCCAAGATATATTTTCCTGAGTTAAATCGTAAATCCAGTCTT
GAGAAAGATCTCTGTTTCTACTATGGAAATAGTTGGCAAGAGTCTATAGAACCATCTGCTGCTGCAAATAACTATGTAGA
AAGAATTCATGAAGTAGCGACTACTCATCCAGAGCTACTAATTGCACACTCATATACACGCTATTTAGGCGACCTTTCAG
GAGGACAAATTCTCAAGGGTATAGCTGAGCGTTCGATGAATCTATCGAATGGCGCTGGGACTGCCTTTTATGAATTTGAG
TCCATCCCTGATGCGAAGGAGTTCAAGGAAGCCTATCGTCAAGCACTGAATGAACTGCCAATCAATGAGACGGTTGCTCA
TCAAATTGTAGATGAAGCTAATGCTGCATTTGGGCTCAATATGTTGATGTTTCAAGAGCTTGAAGGTAGTCTCATTAAAG
CGATTGGGCAGATGCTTTTCAACACGCTCACACGACGCCGCAAACAAAACGGTCCTAACCTTGCGATAGCTGAATGA

Upstream 100 bases:

>100_bases
GGAAGGGTTGTTCAAATTAACCTAATGTAGCTAACAAGGTTATCTTTTTCACAATTAGATTTTTTATCAGCAGTTATCAT
CAAGAAATGGGAAGTTTGGC

Downstream 100 bases:

>100_bases
TTTAGTTCATTATTCCTTTTCTACGGCTTGTTTTCCATAACACCTCAACACAGTTTTAGGCTTAACTCCTTGTTTCGCTA
AACCTCTGTTTTCAACAGAG

Product: heme oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MREKLSIQLSEGTKKAHTMAENVGFVRCFLRGAVDKTSYRNLIANLYFVYTAMEQELRVLKKHPIISKIYFPELNRKSSL
EKDLCFYYGNSWQESIEPSAAANNYVERIHEVATTHPELLIAHSYTRYLGDLSGGQILKGIAERSMNLSNGAGTAFYEFE
SIPDAKEFKEAYRQALNELPINETVAHQIVDEANAAFGLNMLMFQELEGSLIKAIGQMLFNTLTRRRKQNGPNLAIAE

Sequences:

>Translated_238_residues
MREKLSIQLSEGTKKAHTMAENVGFVRCFLRGAVDKTSYRNLIANLYFVYTAMEQELRVLKKHPIISKIYFPELNRKSSL
EKDLCFYYGNSWQESIEPSAAANNYVERIHEVATTHPELLIAHSYTRYLGDLSGGQILKGIAERSMNLSNGAGTAFYEFE
SIPDAKEFKEAYRQALNELPINETVAHQIVDEANAAFGLNMLMFQELEGSLIKAIGQMLFNTLTRRRKQNGPNLAIAE
>Mature_238_residues
MREKLSIQLSEGTKKAHTMAENVGFVRCFLRGAVDKTSYRNLIANLYFVYTAMEQELRVLKKHPIISKIYFPELNRKSSL
EKDLCFYYGNSWQESIEPSAAANNYVERIHEVATTHPELLIAHSYTRYLGDLSGGQILKGIAERSMNLSNGAGTAFYEFE
SIPDAKEFKEAYRQALNELPINETVAHQIVDEANAAFGLNMLMFQELEGSLIKAIGQMLFNTLTRRRKQNGPNLAIAE

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae [H]

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI4504437, Length=210, Percent_Identity=47.1428571428571, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI187761311, Length=206, Percent_Identity=48.0582524271845, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI187761309, Length=206, Percent_Identity=48.0582524271845, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI187761307, Length=206, Percent_Identity=48.0582524271845, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI8051608, Length=206, Percent_Identity=48.0582524271845, Blast_Score=207, Evalue=7e-54,
Organism=Drosophila melanogaster, GI17737779, Length=134, Percent_Identity=29.1044776119403, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 26978; Mature: 26978

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00593 HEME_OXYGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKLSIQLSEGTKKAHTMAENVGFVRCFLRGAVDKTSYRNLIANLYFVYTAMEQELRVL
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKHPIISKIYFPELNRKSSLEKDLCFYYGNSWQESIEPSAAANNYVERIHEVATTHPELL
HHCCCHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHH
IAHSYTRYLGDLSGGQILKGIAERSMNLSNGAGTAFYEFESIPDAKEFKEAYRQALNELP
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
INETVAHQIVDEANAAFGLNMLMFQELEGSLIKAIGQMLFNTLTRRRKQNGPNLAIAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MREKLSIQLSEGTKKAHTMAENVGFVRCFLRGAVDKTSYRNLIANLYFVYTAMEQELRVL
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKHPIISKIYFPELNRKSSLEKDLCFYYGNSWQESIEPSAAANNYVERIHEVATTHPELL
HHCCCHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHH
IAHSYTRYLGDLSGGQILKGIAERSMNLSNGAGTAFYEFESIPDAKEFKEAYRQALNELP
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
INETVAHQIVDEANAAFGLNMLMFQELEGSLIKAIGQMLFNTLTRRRKQNGPNLAIAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]