Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
---|---|
Accession | NC_009928 |
Length | 273,121 |
Click here to switch to the map view.
The map label for this gene is hemH [H]
Identifier: 158340560
GI number: 158340560
Start: 97176
End: 98336
Strand: Direct
Name: hemH [H]
Synonym: AM1_C0107
Alternate gene names: 158340560
Gene position: 97176-98336 (Clockwise)
Preceding gene: 158340558
Following gene: 158340561
Centisome position: 35.58
GC content: 43.58
Gene sequence:
>1161_bases ATGAGCCGAGCAGGAATATTGCTGTTAAATTTGGGAGGGCCTGAGAGGCTAAGAGACGTCCGCCCCTTTCTATATAATCT ATTTTCAGATCCAGAAATCATCCGTTTACGCTTTCCTGTTTTACAGGCTCCGCTTGCATGGTTAATTTCTGTATTAAGGT CTAGTAAATCTGAGAAAAACTACCAAAAGATTGGTGGTTTTTCTCCCTTGCGCGAGATTACTGAGTCCCAGGCATTTGCA TTACAACAGGCATTATGTTCAGCAGGCTATCCGATTAAAACCTATGTAGGGATGAGATATTGGCATCCCTTTACGGAAGA AGCCATCGAGCAAATAAAGCGAGACAGAATCACCGATCTCGTCATTCTTCCCCTTTACCCGCAGTTTTCAATTAGTACCA GTGGATCTAGCTTTCGCCAACTAGAGAAAATTTGGATGGCCGATCCAGGCTTGCAGACCATTAACTATACAATCATTCCT TCTTGGCACGACTGCAAAGACTATATTCGAGCGATAGCTGATTTGATAGATGGCTGCATTGATCAGCAACCTGATGCCCA TCAGGCCCATTTATTTTTTAGCGCTCATGGTGTACCCGTCAGCTATGTCGAAGAAGCTGGCGATCCTTATCAAGATGAGG TTGAGAAATGTGTGGGTTTAATTATGAAGGCCCTAAACAGGGATATACCTTACACATTGGCTTACCAAAGCCGAGTAGGT CCAATTGAATGGCTGAAGCCTTATACGGACGAGGCAATTGTCGAAGTTGCACAACAAGGGTATAAAGAGCTAGTTGTTGT CCCCATTAGTTTTGTCTCAGACCATATTGAGACCCTCGAAGAAATTGACATAGAGTATCGGGAGATAGCGATCAATGCTG GGATAGAAACTTTTATTAGAGTTCCTGCCCTCAACACAAATCCAGACTTTATTCAAGCCCTAGCCAAGTTGGTCATTCAA GCCTTAAGTGAACGCCCTGTTTTATTTAGTGATGTTTGTCCAGAGAACGCAGTGAAATTGTATCCTCAAGAACAATGGGC TTGGGGAATAACTCCCTCCGCAGAGGTCTGGAATGGGCGACTAGCTATGTTTGGGATGTTGGGAGTACTACTTGAATATT TCGTAGGATCTGGACCGCTACATTTATTAGGCTTAATGTAG
Upstream 100 bases:
>100_bases TGTAACAATATTTGATATCTTTACAATTGTAATGAAAAACTTGAAGATAGGCCTTGGTTTGACGGTATGTCTGAAAGTTG AACTCATCTGAGCCATAGGT
Downstream 100 bases:
>100_bases TCATGGTCATAGTGAGGATGTTTAACCTGCCTCTCTTATTGGACTATTAAGAAATTGTAATGGAAGGGTTGTTCAAATTA ACCTAATGTAGCTAACAAGG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSRAGILLLNLGGPERLRDVRPFLYNLFSDPEIIRLRFPVLQAPLAWLISVLRSSKSEKNYQKIGGFSPLREITESQAFA LQQALCSAGYPIKTYVGMRYWHPFTEEAIEQIKRDRITDLVILPLYPQFSISTSGSSFRQLEKIWMADPGLQTINYTIIP SWHDCKDYIRAIADLIDGCIDQQPDAHQAHLFFSAHGVPVSYVEEAGDPYQDEVEKCVGLIMKALNRDIPYTLAYQSRVG PIEWLKPYTDEAIVEVAQQGYKELVVVPISFVSDHIETLEEIDIEYREIAINAGIETFIRVPALNTNPDFIQALAKLVIQ ALSERPVLFSDVCPENAVKLYPQEQWAWGITPSAEVWNGRLAMFGMLGVLLEYFVGSGPLHLLGLM
Sequences:
>Translated_386_residues MSRAGILLLNLGGPERLRDVRPFLYNLFSDPEIIRLRFPVLQAPLAWLISVLRSSKSEKNYQKIGGFSPLREITESQAFA LQQALCSAGYPIKTYVGMRYWHPFTEEAIEQIKRDRITDLVILPLYPQFSISTSGSSFRQLEKIWMADPGLQTINYTIIP SWHDCKDYIRAIADLIDGCIDQQPDAHQAHLFFSAHGVPVSYVEEAGDPYQDEVEKCVGLIMKALNRDIPYTLAYQSRVG PIEWLKPYTDEAIVEVAQQGYKELVVVPISFVSDHIETLEEIDIEYREIAINAGIETFIRVPALNTNPDFIQALAKLVIQ ALSERPVLFSDVCPENAVKLYPQEQWAWGITPSAEVWNGRLAMFGMLGVLLEYFVGSGPLHLLGLM >Mature_385_residues SRAGILLLNLGGPERLRDVRPFLYNLFSDPEIIRLRFPVLQAPLAWLISVLRSSKSEKNYQKIGGFSPLREITESQAFAL QQALCSAGYPIKTYVGMRYWHPFTEEAIEQIKRDRITDLVILPLYPQFSISTSGSSFRQLEKIWMADPGLQTINYTIIPS WHDCKDYIRAIADLIDGCIDQQPDAHQAHLFFSAHGVPVSYVEEAGDPYQDEVEKCVGLIMKALNRDIPYTLAYQSRVGP IEWLKPYTDEAIVEVAQQGYKELVVVPISFVSDHIETLEEIDIEYREIAINAGIETFIRVPALNTNPDFIQALAKLVIQA LSERPVLFSDVCPENAVKLYPQEQWAWGITPSAEVWNGRLAMFGMLGVLLEYFVGSGPLHLLGLM
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=322, Percent_Identity=40.6832298136646, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI60499021, Length=322, Percent_Identity=40.6832298136646, Blast_Score=207, Evalue=1e-53, Organism=Escherichia coli, GI1786681, Length=328, Percent_Identity=31.7073170731707, Blast_Score=136, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6324750, Length=338, Percent_Identity=36.6863905325444, Blast_Score=186, Evalue=6e-48, Organism=Drosophila melanogaster, GI17864156, Length=341, Percent_Identity=35.4838709677419, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24651774, Length=256, Percent_Identity=33.984375, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI45552018, Length=136, Percent_Identity=43.3823529411765, Blast_Score=115, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 43665; Mature: 43534
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00626 RCC1_2 ; PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAGILLLNLGGPERLRDVRPFLYNLFSDPEIIRLRFPVLQAPLAWLISVLRSSKSEKN CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCH YQKIGGFSPLREITESQAFALQQALCSAGYPIKTYVGMRYWHPFTEEAIEQIKRDRITDL HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCHHHHHHHHHHHHCCCCE VILPLYPQFSISTSGSSFRQLEKIWMADPGLQTINYTIIPSWHDCKDYIRAIADLIDGCI EEEECCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH DQQPDAHQAHLFFSAHGVPVSYVEEAGDPYQDEVEKCVGLIMKALNRDIPYTLAYQSRVG CCCCCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC PIEWLKPYTDEAIVEVAQQGYKELVVVPISFVSDHIETLEEIDIEYREIAINAGIETFIR CHHHHCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHEECCCHHHHEE VPALNTNPDFIQALAKLVIQALSERPVLFSDVCPENAVKLYPQEQWAWGITPSAEVWNGR CCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCEECCCCCCCCCCCCCCHHHHCCH LAMFGMLGVLLEYFVGSGPLHLLGLM HHHHHHHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure SRAGILLLNLGGPERLRDVRPFLYNLFSDPEIIRLRFPVLQAPLAWLISVLRSSKSEKN CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCH YQKIGGFSPLREITESQAFALQQALCSAGYPIKTYVGMRYWHPFTEEAIEQIKRDRITDL HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCHHHHHHHHHHHHCCCCE VILPLYPQFSISTSGSSFRQLEKIWMADPGLQTINYTIIPSWHDCKDYIRAIADLIDGCI EEEECCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH DQQPDAHQAHLFFSAHGVPVSYVEEAGDPYQDEVEKCVGLIMKALNRDIPYTLAYQSRVG CCCCCCCCEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC PIEWLKPYTDEAIVEVAQQGYKELVVVPISFVSDHIETLEEIDIEYREIAINAGIETFIR CHHHHCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHEECCCHHHHEE VPALNTNPDFIQALAKLVIQALSERPVLFSDVCPENAVKLYPQEQWAWGITPSAEVWNGR CCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCEECCCCCCCCCCCCCCHHHHCCH LAMFGMLGVLLEYFVGSGPLHLLGLM HHHHHHHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA