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The map label for this gene is hli [H]

Identifier: 158340558

GI number: 158340558

Start: 95613

End: 96647

Strand: Direct

Name: hli [H]

Synonym: AM1_C0105

Alternate gene names: 158340558

Gene position: 95613-96647 (Clockwise)

Preceding gene: 158340557

Following gene: 158340560

Centisome position: 35.01

GC content: 47.54

Gene sequence:

>1035_bases
ATGCAAACCTACGGTAACCCTAATGTTACCTACGACTGGTGGGCAGGTAACTCCCGCCTAGCAAGCTCTTCGGGTTTATT
TATATCCGCTCACGCTGGACATGCCGGGCTCATATCCGTCTGGGCAGGTGGTTTCACCCTATTCGAATTGGGACGATACA
GCCCTGATTTCCCCATGTGGAGCCAAGGATTGGTTCTTCTCCCCCACTTGGCAGCGGAAGGGATTGGCATCGGTGCTGGT
GGTGTAATCGTTGATCCTCAAACGATCTTTGCGGTTGGCATGGTGCACATCATAGCTGGTGCGGTGTTAGGTGCTGGAGC
ACTATTTCATCTACTCAAAGCACCTCACGACTTGAGTGAGGCTTCTGGACGAGCGAGTACCTATCACTTTGAATGGGATA
ACACAGAGCAGCTTAGCCGTATACTCGGGCATCATCTACTCATTTTGGGATTCTATGCCCTGCTGTTTGCAGCTCGAGGT
ATGTTTTGGGGTGGGTTGTACGATCCTGATATCCAAGATGTCAGATTGGTGACGAATCCAACCCTTAATCCAGCCGTCAT
ATTTGGTTACCAGACTCATTTTGACAGTGTTGATAATCTCGAAGATATTGTCGGTGGCCATATTTTCGTCGGTCTGTTCA
TTATCGCAGGGGGCATTTTCCACCTGTTGGTTCCGATGTTATCTTGGGCCAAAGAGCGGGTTCTTGTGAATGGAGAAGCC
ATTCTGTCCTATTCTCTGGGAGCAGTAGCTTTCTTTGGATTTTTATCTGCCTATTGGTGTTCTGTAAATACCTACGTATG
GCCTGAAGAGTTTTACGGTCCTGCCTTACAAATCAAGTTTGGAATAACTCCCTATTTTGCTGATACGTTAGATCTCCCTG
TTGGTGTGCACTCTGCTCGGTGTTGGTTATCCAATGCTACCTATATCTTGGCGTTCTATTTTCTCCAAGGTCACCTATGG
CATGCCCTCAGAGGTCTAGGCTTTGATTTCAAGAAGGTAGATGAGTTCATCAATTCCATGGCTTACGAGACATAA

Upstream 100 bases:

>100_bases
TCCAATTGGTGGCGAACAGATACCAACTTCAACCATCACTTGACATTTTCCTGGTTGGGATGATCAACAAGAAATAATTA
ATTTGGAAGGAGACTTTTTT

Downstream 100 bases:

>100_bases
GCTATTACGGTTAAGGACAAGATTTGGAAAAATACCATGGCTCTAAAAATCCTCTGAAGGGCAATCTAAACAATCAAATA
GCTTGGATTTGACCTTCTTT

Product: high light inducible protein

Products: NA

Alternate protein names: CP43' [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MQTYGNPNVTYDWWAGNSRLASSSGLFISAHAGHAGLISVWAGGFTLFELGRYSPDFPMWSQGLVLLPHLAAEGIGIGAG
GVIVDPQTIFAVGMVHIIAGAVLGAGALFHLLKAPHDLSEASGRASTYHFEWDNTEQLSRILGHHLLILGFYALLFAARG
MFWGGLYDPDIQDVRLVTNPTLNPAVIFGYQTHFDSVDNLEDIVGGHIFVGLFIIAGGIFHLLVPMLSWAKERVLVNGEA
ILSYSLGAVAFFGFLSAYWCSVNTYVWPEEFYGPALQIKFGITPYFADTLDLPVGVHSARCWLSNATYILAFYFLQGHLW
HALRGLGFDFKKVDEFINSMAYET

Sequences:

>Translated_344_residues
MQTYGNPNVTYDWWAGNSRLASSSGLFISAHAGHAGLISVWAGGFTLFELGRYSPDFPMWSQGLVLLPHLAAEGIGIGAG
GVIVDPQTIFAVGMVHIIAGAVLGAGALFHLLKAPHDLSEASGRASTYHFEWDNTEQLSRILGHHLLILGFYALLFAARG
MFWGGLYDPDIQDVRLVTNPTLNPAVIFGYQTHFDSVDNLEDIVGGHIFVGLFIIAGGIFHLLVPMLSWAKERVLVNGEA
ILSYSLGAVAFFGFLSAYWCSVNTYVWPEEFYGPALQIKFGITPYFADTLDLPVGVHSARCWLSNATYILAFYFLQGHLW
HALRGLGFDFKKVDEFINSMAYET
>Mature_344_residues
MQTYGNPNVTYDWWAGNSRLASSSGLFISAHAGHAGLISVWAGGFTLFELGRYSPDFPMWSQGLVLLPHLAAEGIGIGAG
GVIVDPQTIFAVGMVHIIAGAVLGAGALFHLLKAPHDLSEASGRASTYHFEWDNTEQLSRILGHHLLILGFYALLFAARG
MFWGGLYDPDIQDVRLVTNPTLNPAVIFGYQTHFDSVDNLEDIVGGHIFVGLFIIAGGIFHLLVPMLSWAKERVLVNGEA
ILSYSLGAVAFFGFLSAYWCSVNTYVWPEEFYGPALQIKFGITPYFADTLDLPVGVHSARCWLSNATYILAFYFLQGHLW
HALRGLGFDFKKVDEFINSMAYET

Specific function: Functions as an antenna for photosystem I (PSI) under iron-limiting conditions, when phycobilisomes disappear. Also functions as a dissipator of light energy, protecting cells from excessive light under iron-deficient conditions. Sequesters chlorophyll wh

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein. Note=Probably the major component of the CPVI-4 chlorophyll-protein complex [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbB/psbC family. IsiA/pcb subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000932 [H]

Pfam domain/function: PF00421 PSII [H]

EC number: NA

Molecular weight: Translated: 37762; Mature: 37762

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTYGNPNVTYDWWAGNSRLASSSGLFISAHAGHAGLISVWAGGFTLFELGRYSPDFPMW
CCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCCHHHHHCCCCEEHHCCCCCCCCCC
SQGLVLLPHLAAEGIGIGAGGVIVDPQTIFAVGMVHIIAGAVLGAGALFHLLKAPHDLSE
CCCCEEECHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASGRASTYHFEWDNTEQLSRILGHHLLILGFYALLFAARGMFWGGLYDPDIQDVRLVTNP
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
TLNPAVIFGYQTHFDSVDNLEDIVGGHIFVGLFIIAGGIFHLLVPMLSWAKERVLVNGEA
CCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
ILSYSLGAVAFFGFLSAYWCSVNTYVWPEEFYGPALQIKFGITPYFADTLDLPVGVHSAR
HHHHHHHHHHHHHHHHHHHHHCCCEECCHHHCCCEEEEEECCCCHHHCCCCCCCCCCHHH
CWLSNATYILAFYFLQGHLWHALRGLGFDFKKVDEFINSMAYET
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTYGNPNVTYDWWAGNSRLASSSGLFISAHAGHAGLISVWAGGFTLFELGRYSPDFPMW
CCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCCHHHHHCCCCEEHHCCCCCCCCCC
SQGLVLLPHLAAEGIGIGAGGVIVDPQTIFAVGMVHIIAGAVLGAGALFHLLKAPHDLSE
CCCCEEECHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASGRASTYHFEWDNTEQLSRILGHHLLILGFYALLFAARGMFWGGLYDPDIQDVRLVTNP
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
TLNPAVIFGYQTHFDSVDNLEDIVGGHIFVGLFIIAGGIFHLLVPMLSWAKERVLVNGEA
CCCCEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
ILSYSLGAVAFFGFLSAYWCSVNTYVWPEEFYGPALQIKFGITPYFADTLDLPVGVHSAR
HHHHHHHHHHHHHHHHHHHHHCCCEECCHHHCCCEEEEEECCCCHHHCCCCCCCCCCHHH
CWLSNATYILAFYFLQGHLWHALRGLGFDFKKVDEFINSMAYET
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3141374; 8022940; 12460685 [H]