Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340543
Identifier: 158340543
GI number: 158340543
Start: 84438
End: 85217
Strand: Reverse
Name: 158340543
Synonym: AM1_C0090
Alternate gene names: NA
Gene position: 85217-84438 (Counterclockwise)
Preceding gene: 158340544
Following gene: 158340541
Centisome position: 31.2
GC content: 40.64
Gene sequence:
>780_bases ATGACAAACTCTGAAGAGATTTATCAACCTGAAGAAGTTCCACCGCAACCTGAAGATGTTGATGACAACGAAGTTGAAGC TAGTGAAGATACTCAAGCAAATCTGAATGACACGAAGGATACTCAATTACAACTTGATGATGTTGATGGCGATGAAGCTG ATGAAGATACTCAAGTAAGCCAAGTTGATACGCAAGGTACTCAACAAGCTGAAGAAGCTCAACTACAGCCTGATGATGAG ATTAGTGAAGGTACTCTGGTAAATCAGGCTGCCTCACTAGATACTCCTACACAAATTGAAGATTTTGATGATGATATTGC TAGTGCAGATACTCAGGCAAATCTGGATGATACGAAGGATACTCAATCACAACTTGATGATGTTGATGACGATGAAGCTA ATGAAGATACTCAAGTAAGCCAAGTTGATACGCAAGATACACAACAAGTTGAAGAAGCTCAACTACTGCTTGACGATGAG GCTAGTTCTGACATTCAGGTAAATCAGGCTGACTCACTAGATATTCCACTGCAACTTGAAGAAGTTGATGACGATGAGGC TAGTGCTGATACTCAAGCAAGCCAAGCTGACACACAAGATGTTCAACAATACTTGAAAAATCTTTCAAGAGAAGATGCCA GTTCTGACGATCAACGCTTGATATTTGACACAGAAACAGGTGAACTGGTCATCCAGCAGAAAGAAATTCCCTTAAATCCG GATGCTGTCGTTGCTGATTCAATTGCTGAGCAAGGTTTTTTCTTTGAGGTGGCAAATTGA
Upstream 100 bases:
>100_bases TAAAATTTGTTTAGGATATACCCTAGCTAAGTTATAAAAATACTAGTCTTTTAAGATAGCTAATGTGCTTTTATAGTGCA GACTCAAGAAAATAGATGTT
Downstream 100 bases:
>100_bases ATAAGGCTTAATGAAGGCAAAGGTCAATTGTCCTCTAGATAGCTACTTTAAAAAGCCACTAGCTGTTTTTCTAACTATTA TGATATGTGTGGGAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTNSEEIYQPEEVPPQPEDVDDNEVEASEDTQANLNDTKDTQLQLDDVDGDEADEDTQVSQVDTQGTQQAEEAQLQPDDE ISEGTLVNQAASLDTPTQIEDFDDDIASADTQANLDDTKDTQSQLDDVDDDEANEDTQVSQVDTQDTQQVEEAQLLLDDE ASSDIQVNQADSLDIPLQLEEVDDDEASADTQASQADTQDVQQYLKNLSREDASSDDQRLIFDTETGELVIQQKEIPLNP DAVVADSIAEQGFFFEVAN
Sequences:
>Translated_259_residues MTNSEEIYQPEEVPPQPEDVDDNEVEASEDTQANLNDTKDTQLQLDDVDGDEADEDTQVSQVDTQGTQQAEEAQLQPDDE ISEGTLVNQAASLDTPTQIEDFDDDIASADTQANLDDTKDTQSQLDDVDDDEANEDTQVSQVDTQDTQQVEEAQLLLDDE ASSDIQVNQADSLDIPLQLEEVDDDEASADTQASQADTQDVQQYLKNLSREDASSDDQRLIFDTETGELVIQQKEIPLNP DAVVADSIAEQGFFFEVAN >Mature_258_residues TNSEEIYQPEEVPPQPEDVDDNEVEASEDTQANLNDTKDTQLQLDDVDGDEADEDTQVSQVDTQGTQQAEEAQLQPDDEI SEGTLVNQAASLDTPTQIEDFDDDIASADTQANLDDTKDTQSQLDDVDDDEANEDTQVSQVDTQDTQQVEEAQLLLDDEA SSDIQVNQADSLDIPLQLEEVDDDEASADTQASQADTQDVQQYLKNLSREDASSDDQRLIFDTETGELVIQQKEIPLNPD AVVADSIAEQGFFFEVAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28523; Mature: 28391
Theoretical pI: Translated: 2.95; Mature: 2.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSEEIYQPEEVPPQPEDVDDNEVEASEDTQANLNDTKDTQLQLDDVDGDEADEDTQVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHH QVDTQGTQQAEEAQLQPDDEISEGTLVNQAASLDTPTQIEDFDDDIASADTQANLDDTKD HHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHH TQSQLDDVDDDEANEDTQVSQVDTQDTQQVEEAQLLLDDEASSDIQVNQADSLDIPLQLE HHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEE EVDDDEASADTQASQADTQDVQQYLKNLSREDASSDDQRLIFDTETGELVIQQKEIPLNP CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCC DAVVADSIAEQGFFFEVAN CHHHHHHHHHCCCEEEECC >Mature Secondary Structure TNSEEIYQPEEVPPQPEDVDDNEVEASEDTQANLNDTKDTQLQLDDVDGDEADEDTQVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHH QVDTQGTQQAEEAQLQPDDEISEGTLVNQAASLDTPTQIEDFDDDIASADTQANLDDTKD HHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHH TQSQLDDVDDDEANEDTQVSQVDTQDTQQVEEAQLLLDDEASSDIQVNQADSLDIPLQLE HHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEE EVDDDEASADTQASQADTQDVQQYLKNLSREDASSDDQRLIFDTETGELVIQQKEIPLNP CCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCCC DAVVADSIAEQGFFFEVAN CHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA