Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340541
Identifier: 158340541
GI number: 158340541
Start: 84033
End: 84182
Strand: Reverse
Name: 158340541
Synonym: AM1_C0088
Alternate gene names: NA
Gene position: 84182-84033 (Counterclockwise)
Preceding gene: 158340543
Following gene: 158340538
Centisome position: 30.82
GC content: 44.67
Gene sequence:
>150_bases TTGCCATCGTATGGATGTGAGATCAACGATATAGAACATCAATGGCCTGATCCCCAAGTTGTCATGGATGCTGCACACCT TGGCCCAAAAACTATGGCAGAGATGATTGCACTCCAATGTCCTAGTTTCAAGTTTTTGGGCAACTTGTAG
Upstream 100 bases:
>100_bases GTAAATGCCAGACTCCCCAAGCCAACTCAGAAAATCTTGCCAGAATTGTATCCACTTGCAAAAGCTCAACCTTAGGGGAA TTCTTTGGGATGGAACTTCC
Downstream 100 bases:
>100_bases GTATCATCCATCAGACTGCTCTGGAAGCCCATTCACTTTGAGCATTAATGCGACAGGCTGCCAAATCACTCAAAATTCAC CGATAGACCATTCGCCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MPSYGCEINDIEHQWPDPQVVMDAAHLGPKTMAEMIALQCPSFKFLGNL
Sequences:
>Translated_49_residues MPSYGCEINDIEHQWPDPQVVMDAAHLGPKTMAEMIALQCPSFKFLGNL >Mature_48_residues PSYGCEINDIEHQWPDPQVVMDAAHLGPKTMAEMIALQCPSFKFLGNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5475; Mature: 5344
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYGCEINDIEHQWPDPQVVMDAAHLGPKTMAEMIALQCPSFKFLGNL CCCCCCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PSYGCEINDIEHQWPDPQVVMDAAHLGPKTMAEMIALQCPSFKFLGNL CCCCCCCCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA