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The map label for this gene is ydaV [C]

Identifier: 158340534

GI number: 158340534

Start: 77468

End: 78223

Strand: Direct

Name: ydaV [C]

Synonym: AM1_C0079

Alternate gene names: 158340534

Gene position: 77468-78223 (Clockwise)

Preceding gene: 158340533

Following gene: 158340539

Centisome position: 28.36

GC content: 48.81

Gene sequence:

>756_bases
TTGCTGATGACAACCCTAAAACAGTTGCGGTTGAGGCATTTCCTCGACGAGTGGCAGAGCATCGAGCATCAAGCGACTCA
GGAGAATTGGTCCTACGCCCAGTTTCTGTTGGCTTTAGCTCAAGGCGAAGCCAGCCGTCGGGAGCAGAATCGGATTTCAC
GCGCTCTAACCGAAGCGCAGCTGCCTTACGGAAAGTCCTGGACCAATTTTGAGTTTGCCCATGTTCCCACCCTTAATCCA
GCTGCTCTCATGGAGTTTGCCCAAACGACTCACTGGCTAGAGTCCGGTAGCAACATTCTAATTTTTGGGCCGAGCGGAAC
AGGGAAAACACACGTCAGCTCTGCATTAGGAGCTTCTATTATTGAGTTGGGTAAGCGAGTAAAATTTGTCACAGCCACAA
CCCTGGTGCAACAACTACAGCTGGCCAAACTTCAATTGGAATTGCAGAGTCTCTTGTCCAAACTTGACCGCTATGATCTG
CTTATCATTGATGATCTCGGTTATGTCCAAAAGTCCGATGTTGAAACCTCGGTACTGTTTGAGTTGATTGCTCACCGGTA
TGAGCGAAAGAGCCTACTCATCACGGCTAATCAACCTTTCAGTCAATGGGACAGCATCTTTCCTAACTCAATGATGACCG
TGGCTGCCATTGATCGCTTAATTCACCACGCCACCATTTTCGAGATGCAAGCAGAAAGCTTCCGCAAACAAGAAGCGGCC
AAACACACAGCCAAGTCTCAAAAGACTGACAGCTGA

Upstream 100 bases:

>100_bases
AAGCTCTCGACTGAGCAATATCCTGACGTCACCTCACAACAGCACGATTTATCTGACTATGATCAACTCCTCCACAGCAG
ACCCGGACAACCCATACCAG

Downstream 100 bases:

>100_bases
TCTCTAGTCAGAATAAAACCTCTGTACCCCACTATTAATAGAGTTGCTTACTTATAAGCAACTCTATTAATAGTGGCTTT
ATTGATAATTGTCATTTTGT

Product: transposase-associated ATP-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLMTTLKQLRLRHFLDEWQSIEHQATQENWSYAQFLLALAQGEASRREQNRISRALTEAQLPYGKSWTNFEFAHVPTLNP
AALMEFAQTTHWLESGSNILIFGPSGTGKTHVSSALGASIIELGKRVKFVTATTLVQQLQLAKLQLELQSLLSKLDRYDL
LIIDDLGYVQKSDVETSVLFELIAHRYERKSLLITANQPFSQWDSIFPNSMMTVAAIDRLIHHATIFEMQAESFRKQEAA
KHTAKSQKTDS

Sequences:

>Translated_251_residues
MLMTTLKQLRLRHFLDEWQSIEHQATQENWSYAQFLLALAQGEASRREQNRISRALTEAQLPYGKSWTNFEFAHVPTLNP
AALMEFAQTTHWLESGSNILIFGPSGTGKTHVSSALGASIIELGKRVKFVTATTLVQQLQLAKLQLELQSLLSKLDRYDL
LIIDDLGYVQKSDVETSVLFELIAHRYERKSLLITANQPFSQWDSIFPNSMMTVAAIDRLIHHATIFEMQAESFRKQEAA
KHTAKSQKTDS
>Mature_251_residues
MLMTTLKQLRLRHFLDEWQSIEHQATQENWSYAQFLLALAQGEASRREQNRISRALTEAQLPYGKSWTNFEFAHVPTLNP
AALMEFAQTTHWLESGSNILIFGPSGTGKTHVSSALGASIIELGKRVKFVTATTLVQQLQLAKLQLELQSLLSKLDRYDL
LIIDDLGYVQKSDVETSVLFELIAHRYERKSLLITANQPFSQWDSIFPNSMMTVAAIDRLIHHATIFEMQAESFRKQEAA
KHTAKSQKTDS

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 28535; Mature: 28535

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMTTLKQLRLRHFLDEWQSIEHQATQENWSYAQFLLALAQGEASRREQNRISRALTEAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
LPYGKSWTNFEFAHVPTLNPAALMEFAQTTHWLESGSNILIFGPSGTGKTHVSSALGASI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
IELGKRVKFVTATTLVQQLQLAKLQLELQSLLSKLDRYDLLIIDDLGYVQKSDVETSVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHH
ELIAHRYERKSLLITANQPFSQWDSIFPNSMMTVAAIDRLIHHATIFEMQAESFRKQEAA
HHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHTAKSQKTDS
HHHHHHCCCCC
>Mature Secondary Structure
MLMTTLKQLRLRHFLDEWQSIEHQATQENWSYAQFLLALAQGEASRREQNRISRALTEAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
LPYGKSWTNFEFAHVPTLNPAALMEFAQTTHWLESGSNILIFGPSGTGKTHVSSALGASI
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
IELGKRVKFVTATTLVQQLQLAKLQLELQSLLSKLDRYDLLIIDDLGYVQKSDVETSVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHH
ELIAHRYERKSLLITANQPFSQWDSIFPNSMMTVAAIDRLIHHATIFEMQAESFRKQEAA
HHHHHHHCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHTAKSQKTDS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]