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The map label for this gene is 158340533

Identifier: 158340533

GI number: 158340533

Start: 75949

End: 77679

Strand: Direct

Name: 158340533

Synonym: AM1_C0078

Alternate gene names: NA

Gene position: 75949-77679 (Clockwise)

Preceding gene: 158340525

Following gene: 158340534

Centisome position: 27.81

GC content: 50.72

Gene sequence:

>1731_bases
GTGCCAGCTCCTATTAAACCTCAACAGGTTCATCTTTATATGCAGACAAAACAATCCGGCTCTTCTCAAGAAACAGCAGC
TGCTAAAGCTGGCATTTCTACCCGCACAGCCCACCGCATTGATAGTGGTACTCATCGTCCCCAACGCGGCCGCCCTCATG
ACTGGAAAACCCGTGAAGATCCGCTGGATGGATTATGGGAATTAGAACTTGAGCCGATGTTAGAGCGTGAGCCTCGATTA
GAAGCGACTACTCTATTTGAGACCTTACAAGAGAACCATCCTGGGCAATATGATGACAAGATCAGAACCGTGCAACGCCG
AACCGCTAAATGGAAGGCAGCTCATGGCAAGCCCAAAGAAGTGATGTTCAAAATTCAACATCATCCTGGGGAGATGGGAC
AGTCAGACTTCGCTCAGCTCAAAGGTTTCAGTGTGACGGTTCAGGGTGAAGCCTTTCACCATATCTTGTATCACTATCGA
CTGAGCTATAGCGGCTGGCAGTACGTGCAGGTGATTCAAGGCGGAGAAAGTTTTATCGGCTTATCCCAAGGGCTACAAAA
TGCTCTAACCGCCTGTGGTGGCGTGCCCAAGATTCATCGTACCGATAGTCTGAGTGCGGCTTATCGCAATACTGGCGGCC
GCAATCCCCAGCTGACCCAGTTGTATTCGACTCTGTGTGACCATTACCGGATGCAGCCAACACGCAACAATCTGGGTGTC
TCTCATGAGAATGGCGGAATAGAGGGGTCTCATGGCTATTTCAAACGACGCCTGTGCCAAGCCCTGTATCGTCGAGGCAG
CTTTGACTTTGACTCGGTAGCTGAGTATCAGCAGTTCATCGAGCAAGTCATCGCCAAGCTGAATGCCAAGTGCCAAAAAA
AGTTTGCACTGGAGCTGCCCACCTTACAGCCCTTGCCCAGATACCGAACTCCTGATTATGAAGTGCGCAGTGCCAAAGTC
AGCTGCAATAGCACGATTGCCGTCCGCTGTGTCCTTTACACAGTCCCCTCTCGCTTAATTGGCCACCGCTTGAAATTACA
CCTATACCATGACCGCCTTGTCGGTTTCTTAGGCACCACTCCCGTAGTGGAATTGGCGCGGGTCCATGTCCATGGCTCTG
AGAAGAAAAGACGCGCTCGCAGCATCGATTACAAGCATGTGGCAGAAAGTCTCAGGAGAAAGCCAAACGCGTTTCTCTAC
TGCCAATGGCAATCAGAGCTACTGCCCAATCTTCAGTGGCATCAGCTGTGGGAATCACTCAAAGCTAATTTTGAGCAGGA
CCAGGCCGCACGATTAATCACCGAAGCCCTCTATATCGCTGCAACTCAAGATCAAGAATCTCAGGTGGCTGACTACCTAC
AAACTCAACTGGAACAGTCCACCCTGACCTTGAGCAGATTAAAACAAGCCTTTGAATTCAAGCTCTCGACTGAGCAATAT
CCTGACGTCACCTCACAACAGCACGATTTATCTGACTATGATCAACTCCTCCACAGCAGACCCGGACAACCCATACCAGT
TGCTGATGACAACCCTAAAACAGTTGCGGTTGAGGCATTTCCTCGACGAGTGGCAGAGCATCGAGCATCAAGCGACTCAG
GAGAATTGGTCCTACGCCCAGTTTCTGTTGGCTTTAGCTCAAGGCGAAGCCAGCCGTCGGGAGCAGAATCGGATTTCACG
CGCTCTAACCGAAGCGCAGCTGCCTTACGGAAAGTCCTGGACCAATTTTGA

Upstream 100 bases:

>100_bases
GATCACATCTGCAGAGAGAGCATCAGTCACTTTCGATTTTTTATATCCCCATACAGGAAAGACACTAGGGTTTGTACTCC
TACGCAATTAGGAACCTCTA

Downstream 100 bases:

>100_bases
GTTTGCCCATGTTCCCACCCTTAATCCAGCTGCTCTCATGGAGTTTGCCCAAACGACTCACTGGCTAGAGTCCGGTAGCA
ACATTCTAATTTTTGGGCCG

Product: transposase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MPAPIKPQQVHLYMQTKQSGSSQETAAAKAGISTRTAHRIDSGTHRPQRGRPHDWKTREDPLDGLWELELEPMLEREPRL
EATTLFETLQENHPGQYDDKIRTVQRRTAKWKAAHGKPKEVMFKIQHHPGEMGQSDFAQLKGFSVTVQGEAFHHILYHYR
LSYSGWQYVQVIQGGESFIGLSQGLQNALTACGGVPKIHRTDSLSAAYRNTGGRNPQLTQLYSTLCDHYRMQPTRNNLGV
SHENGGIEGSHGYFKRRLCQALYRRGSFDFDSVAEYQQFIEQVIAKLNAKCQKKFALELPTLQPLPRYRTPDYEVRSAKV
SCNSTIAVRCVLYTVPSRLIGHRLKLHLYHDRLVGFLGTTPVVELARVHVHGSEKKRRARSIDYKHVAESLRRKPNAFLY
CQWQSELLPNLQWHQLWESLKANFEQDQAARLITEALYIAATQDQESQVADYLQTQLEQSTLTLSRLKQAFEFKLSTEQY
PDVTSQQHDLSDYDQLLHSRPGQPIPVADDNPKTVAVEAFPRRVAEHRASSDSGELVLRPVSVGFSSRRSQPSGAESDFT
RSNRSAAALRKVLDQF

Sequences:

>Translated_576_residues
MPAPIKPQQVHLYMQTKQSGSSQETAAAKAGISTRTAHRIDSGTHRPQRGRPHDWKTREDPLDGLWELELEPMLEREPRL
EATTLFETLQENHPGQYDDKIRTVQRRTAKWKAAHGKPKEVMFKIQHHPGEMGQSDFAQLKGFSVTVQGEAFHHILYHYR
LSYSGWQYVQVIQGGESFIGLSQGLQNALTACGGVPKIHRTDSLSAAYRNTGGRNPQLTQLYSTLCDHYRMQPTRNNLGV
SHENGGIEGSHGYFKRRLCQALYRRGSFDFDSVAEYQQFIEQVIAKLNAKCQKKFALELPTLQPLPRYRTPDYEVRSAKV
SCNSTIAVRCVLYTVPSRLIGHRLKLHLYHDRLVGFLGTTPVVELARVHVHGSEKKRRARSIDYKHVAESLRRKPNAFLY
CQWQSELLPNLQWHQLWESLKANFEQDQAARLITEALYIAATQDQESQVADYLQTQLEQSTLTLSRLKQAFEFKLSTEQY
PDVTSQQHDLSDYDQLLHSRPGQPIPVADDNPKTVAVEAFPRRVAEHRASSDSGELVLRPVSVGFSSRRSQPSGAESDFT
RSNRSAAALRKVLDQF
>Mature_575_residues
PAPIKPQQVHLYMQTKQSGSSQETAAAKAGISTRTAHRIDSGTHRPQRGRPHDWKTREDPLDGLWELELEPMLEREPRLE
ATTLFETLQENHPGQYDDKIRTVQRRTAKWKAAHGKPKEVMFKIQHHPGEMGQSDFAQLKGFSVTVQGEAFHHILYHYRL
SYSGWQYVQVIQGGESFIGLSQGLQNALTACGGVPKIHRTDSLSAAYRNTGGRNPQLTQLYSTLCDHYRMQPTRNNLGVS
HENGGIEGSHGYFKRRLCQALYRRGSFDFDSVAEYQQFIEQVIAKLNAKCQKKFALELPTLQPLPRYRTPDYEVRSAKVS
CNSTIAVRCVLYTVPSRLIGHRLKLHLYHDRLVGFLGTTPVVELARVHVHGSEKKRRARSIDYKHVAESLRRKPNAFLYC
QWQSELLPNLQWHQLWESLKANFEQDQAARLITEALYIAATQDQESQVADYLQTQLEQSTLTLSRLKQAFEFKLSTEQYP
DVTSQQHDLSDYDQLLHSRPGQPIPVADDNPKTVAVEAFPRRVAEHRASSDSGELVLRPVSVGFSSRRSQPSGAESDFTR
SNRSAAALRKVLDQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 65593; Mature: 65461

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPIKPQQVHLYMQTKQSGSSQETAAAKAGISTRTAHRIDSGTHRPQRGRPHDWKTRED
CCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PLDGLWELELEPMLEREPRLEATTLFETLQENHPGQYDDKIRTVQRRTAKWKAAHGKPKE
CCCCEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
VMFKIQHHPGEMGQSDFAQLKGFSVTVQGEAFHHILYHYRLSYSGWQYVQVIQGGESFIG
HEEEEECCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCHHHH
LSQGLQNALTACGGVPKIHRTDSLSAAYRNTGGRNPQLTQLYSTLCDHYRMQPTRNNLGV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
SHENGGIEGSHGYFKRRLCQALYRRGSFDFDSVAEYQQFIEQVIAKLNAKCQKKFALELP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
TLQPLPRYRTPDYEVRSAKVSCNSTIAVRCVLYTVPSRLIGHRLKLHLYHDRLVGFLGTT
CCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCHHEEEEHHHHHHHHHCCC
PVVELARVHVHGSEKKRRARSIDYKHVAESLRRKPNAFLYCQWQSELLPNLQWHQLWESL
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHH
KANFEQDQAARLITEALYIAATQDQESQVADYLQTQLEQSTLTLSRLKQAFEFKLSTEQY
HCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDVTSQQHDLSDYDQLLHSRPGQPIPVADDNPKTVAVEAFPRRVAEHRASSDSGELVLRP
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEE
VSVGFSSRRSQPSGAESDFTRSNRSAAALRKVLDQF
EECCCHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PAPIKPQQVHLYMQTKQSGSSQETAAAKAGISTRTAHRIDSGTHRPQRGRPHDWKTRED
CCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PLDGLWELELEPMLEREPRLEATTLFETLQENHPGQYDDKIRTVQRRTAKWKAAHGKPKE
CCCCEEEECCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
VMFKIQHHPGEMGQSDFAQLKGFSVTVQGEAFHHILYHYRLSYSGWQYVQVIQGGESFIG
HEEEEECCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCHHHH
LSQGLQNALTACGGVPKIHRTDSLSAAYRNTGGRNPQLTQLYSTLCDHYRMQPTRNNLGV
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
SHENGGIEGSHGYFKRRLCQALYRRGSFDFDSVAEYQQFIEQVIAKLNAKCQKKFALELP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCC
TLQPLPRYRTPDYEVRSAKVSCNSTIAVRCVLYTVPSRLIGHRLKLHLYHDRLVGFLGTT
CCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCHHEEEEHHHHHHHHHCCC
PVVELARVHVHGSEKKRRARSIDYKHVAESLRRKPNAFLYCQWQSELLPNLQWHQLWESL
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCHHHHHHHHH
KANFEQDQAARLITEALYIAATQDQESQVADYLQTQLEQSTLTLSRLKQAFEFKLSTEQY
HCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDVTSQQHDLSDYDQLLHSRPGQPIPVADDNPKTVAVEAFPRRVAEHRASSDSGELVLRP
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEE
VSVGFSSRRSQPSGAESDFTRSNRSAAALRKVLDQF
EECCCHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]