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The map label for this gene is 158340522

Identifier: 158340522

GI number: 158340522

Start: 68976

End: 70712

Strand: Reverse

Name: 158340522

Synonym: AM1_C0067

Alternate gene names: NA

Gene position: 70712-68976 (Counterclockwise)

Preceding gene: 158340524

Following gene: 158340521

Centisome position: 25.89

GC content: 50.2

Gene sequence:

>1737_bases
GTGCCTAACAAAAGAATTGATTCCTATCATACTCGTGTTTATATGAACGGAAGAGACCTCGGCTTAAAACAAGCTGATGC
AGCTTACATTGCCGAAATATCTACAAGAACCGGACAACGAATTGAGGCCGGCACCCATCAACCTAATCGCGGCCGCCTTC
AGGACCAACGCACCGTTCCCGACCCCTTAGCTGATGTGTGGGAAGACGAGCTAGAACCAATGCTGCGTCGAGACCCACGC
CTCAAACCCATGACCCTGTATGAGTACCTGCAGGATAAGTATCCAGGCCAGTATCCCCAAGTCCTGCGGACCCTACAACG
TCGGGTGAGAACGTGGAAAGCCTTACATGGACCAAGCCCTGAAGTGATGTTTGAATTGCGTCATGAACCAGGGGTACAAG
GGTTCTCCGATTTTACAGAACTCAAAGGCATCACGATTACCATTGCCGGCAAACCCTTTGAGCACCTGATATACCATTAC
CGTCTGGGATATAGCGGCTGGCGATATGCCCAGATCATCCAAGGAGGCGAAAGCTTTGTTGCCCTCTCAGAAGGATTGCA
AAATGCCTTTGCAGCCTGTGGAGGTGTTCCTACACAGCATCGTACTGATAGTTTGAGTGCAGCCTATCGCAACATGGGCG
GCCGCCGGTCCAAAAACCTCACGCGTTTGTACGACGAACTGTGTGACCACTATCGGCTAGAACCCACTCGTAACAACAAA
GGTGTAGCCCATGAGAATGGCTCCATTGAATCTCCCCATGGCCATCTCAAAAACCGAATTAAGCAGGCGATCTATCTGCG
CGGCAGTGCAGATTTTACGAGCGTTGCTGAGTATCAAGCCTTAATTGATGCACAGGTTGCCAAGTTGAATCAGCAGTGCC
AAACCAAGTATGAGCAAGAGAAAGACCATCTACAACCACTGCCCAAATATCGAACCCCTGACTATGAAGTGCTCACGGCT
AAAGTCAGCAAACGCAGCACCATCGATGTTCGCTGCATTCTATACACCGTCCCTTCTCGACTGATTGGTCGTCAATTGGA
ACTGCATCTATACCATGACCGGATTGTCGGCTATCTGGAGCGACACCCGGTGGTGGAATTGCCGAGGAAGCGCGTCAGTG
GCAAAGGCAAACGTCGCGACCGTTGCATCAACTATCGCCATGTTATTGGTTCAATGCGATTGAAGCCTCGTGCTTTTATC
TATTGCACCTGGCAATCAGACCTACTTCCCAATCCTGAATACCGCCAAATCTGGGAACAGCTCAAAGCCCAATTTGACCT
GGAGCAGGCTGCCAAGATCATCGTGGAAGCCCTGTATATTGCTGCGGTTCAAGATAAAGAACAGGCCGTAGCAGTGTACT
TACAGCAGCAGCTTCGCTCATCCAGCCTTACCCTCAATCGCCTGAAAAAACAGTTTGAGCCGCCTCAGATGAAGCAGGTT
CCTGAACTCAGCATTGAACAACATTCACTTGAACTTTATGACAAACTCCTCCCCTCCTGCTCAGTCCCCGCTGAGCCCCT
ACCAGCACCTGAGCCTCTATTTAAAAAAGCTCAGGCTCTCCCACATGTTGACCCATTGGGAATCTATCGAATCCCAAGCC
ATGCAGGAAAACTGGTCTTATGCGGAATTCTTACTAGCCTTGTGCGAAACGGAGGCCCAACGAAGAGAACAAGCTCGTCT
AAAACGTGCCCTCACCGAAGCCAGGCTCCCAAACGCAAAAAGTTTTACCAACTTTGA

Upstream 100 bases:

>100_bases
TCTCAATTCCCTAGAAATGATGTGTGAGATCGCGTTTCTAGAATTCAATCTCAAGAAAAAAGACACTTTTTACATCCCTA
ATCAATAGAGGGCTGTACAA

Downstream 100 bases:

>100_bases
CTTTAGCCATTGTCCCCAGCTCAATCCAGCTCCCTTGATGCAATTAGCCGCAGATCCGGGTTGGTTGGAGCGCGCCGAGA
ATTGCCTTATTCTGGGGCCC

Product: transposase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MPNKRIDSYHTRVYMNGRDLGLKQADAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVPDPLADVWEDELEPMLRRDPR
LKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSPEVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHY
RLGYSGWRYAQIIQGGESFVALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNK
GVAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQEKDHLQPLPKYRTPDYEVLTA
KVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLERHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFI
YCTWQSDLLPNPEYRQIWEQLKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQV
PELSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVLCGILTSLVRNGGPTKRTSSS
KTCPHRSQAPKRKKFYQL

Sequences:

>Translated_578_residues
MPNKRIDSYHTRVYMNGRDLGLKQADAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVPDPLADVWEDELEPMLRRDPR
LKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSPEVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHY
RLGYSGWRYAQIIQGGESFVALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNK
GVAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQEKDHLQPLPKYRTPDYEVLTA
KVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLERHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFI
YCTWQSDLLPNPEYRQIWEQLKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQV
PELSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVLCGILTSLVRNGGPTKRTSSS
KTCPHRSQAPKRKKFYQL
>Mature_577_residues
PNKRIDSYHTRVYMNGRDLGLKQADAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVPDPLADVWEDELEPMLRRDPRL
KPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSPEVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHYR
LGYSGWRYAQIIQGGESFVALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNKG
VAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQEKDHLQPLPKYRTPDYEVLTAK
VSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLERHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFIY
CTWQSDLLPNPEYRQIWEQLKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQVP
ELSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVLCGILTSLVRNGGPTKRTSSSK
TCPHRSQAPKRKKFYQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 66389; Mature: 66258

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKRIDSYHTRVYMNGRDLGLKQADAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVP
CCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
DPLADVWEDELEPMLRRDPRLKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSP
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
EVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHYRLGYSGWRYAQIIQGGESFV
HHEEEECCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHH
ALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GVAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQE
CCCCCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDHLQPLPKYRTPDYEVLTAKVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLE
HHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEHHHHHHHCCHHHEEEHHHHHHHHHH
RHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFIYCTWQSDLLPNPEYRQIWEQ
HCCHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
LKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQV
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
PELSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCHHHH
CGILTSLVRNGGPTKRTSSSKTCPHRSQAPKRKKFYQL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
PNKRIDSYHTRVYMNGRDLGLKQADAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVP
CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC
DPLADVWEDELEPMLRRDPRLKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSP
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCH
EVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHYRLGYSGWRYAQIIQGGESFV
HHEEEECCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCCHHH
ALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GVAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQE
CCCCCCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDHLQPLPKYRTPDYEVLTAKVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLE
HHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEHHHHHHHCCHHHEEEHHHHHHHHHH
RHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFIYCTWQSDLLPNPEYRQIWEQ
HCCHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHH
LKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQV
HHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
PELSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCHHHH
CGILTSLVRNGGPTKRTSSSKTCPHRSQAPKRKKFYQL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]