Click here to switch to the map view.

The map label for this gene is ydaV [C]

Identifier: 158340521

GI number: 158340521

Start: 68417

End: 69148

Strand: Reverse

Name: ydaV [C]

Synonym: AM1_C0066

Alternate gene names: 158340521

Gene position: 69148-68417 (Counterclockwise)

Preceding gene: 158340522

Following gene: 158340515

Centisome position: 25.32

GC content: 48.22

Gene sequence:

>732_bases
ATGTTGACCCATTGGGAATCTATCGAATCCCAAGCCATGCAGGAAAACTGGTCTTATGCGGAATTCTTACTAGCCTTGTG
CGAAACGGAGGCCCAACGAAGAGAACAAGCTCGTCTAAAACGTGCCCTCACCGAAGCCAGGCTCCCAAACGCAAAAAGTT
TTACCAACTTTGACTTTAGCCATTGTCCCCAGCTCAATCCAGCTCCCTTGATGCAATTAGCCGCAGATCCGGGTTGGTTG
GAGCGCGCCGAGAATTGCCTTATTCTGGGGCCCTCGGGTGTTGGAAAAACACATCTGGCCACTGGGGTGTCCAAAAAGAT
GCTGGAATTCGGTAAGCGGGTGAAGTTCTTTGCAGCCAACGCATTGGTCCAGCAACTGCAACAGGCGAAGCTCCAACTGC
AGCTGCATCCAATGCTCAAAAAACTGGACCGCTATGATCTGTTGATCTTGGATGACTTGGGCTATTGCAAAAAGTCGGAA
GCGGAAACGTCCGTTCTGTTTGAATTAATTGCGCATCGCTATGAACGAAAAAGTTTGTTGATTACAGCGAATCAACCCTT
CAGCCAATGGGATGACATTTTCACTGATTCGATGATGGCGGTGGCTGCCATTGATCGCTTAATTCATCATGGCTTGATTA
TCGAAATTCAAGCCGATAGTTATCGGCGCAAATCAGCGACTCAGAGAACGGCTCAAACTCAGTCTCCACCTCAAAAATCC
CAGTCCAAATAA

Upstream 100 bases:

>100_bases
TCACTTGAACTTTATGACAAACTCCTCCCCTCCTGCTCAGTCCCCGCTGAGCCCCTACCAGCACCTGAGCCTCTATTTAA
AAAAGCTCAGGCTCTCCCAC

Downstream 100 bases:

>100_bases
TCGAGCGATCACTGGTTGTCATTTCGATCACGGGTTGTCGTTTTGTTCTGAAGGTATCGTATGAGGTCTGAAAAAGAGCT
AACGCAAAGGGAGTGTACGC

Product: transposase-associated ATP-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLTHWESIESQAMQENWSYAEFLLALCETEAQRREQARLKRALTEARLPNAKSFTNFDFSHCPQLNPAPLMQLAADPGWL
ERAENCLILGPSGVGKTHLATGVSKKMLEFGKRVKFFAANALVQQLQQAKLQLQLHPMLKKLDRYDLLILDDLGYCKKSE
AETSVLFELIAHRYERKSLLITANQPFSQWDDIFTDSMMAVAAIDRLIHHGLIIEIQADSYRRKSATQRTAQTQSPPQKS
QSK

Sequences:

>Translated_243_residues
MLTHWESIESQAMQENWSYAEFLLALCETEAQRREQARLKRALTEARLPNAKSFTNFDFSHCPQLNPAPLMQLAADPGWL
ERAENCLILGPSGVGKTHLATGVSKKMLEFGKRVKFFAANALVQQLQQAKLQLQLHPMLKKLDRYDLLILDDLGYCKKSE
AETSVLFELIAHRYERKSLLITANQPFSQWDDIFTDSMMAVAAIDRLIHHGLIIEIQADSYRRKSATQRTAQTQSPPQKS
QSK
>Mature_243_residues
MLTHWESIESQAMQENWSYAEFLLALCETEAQRREQARLKRALTEARLPNAKSFTNFDFSHCPQLNPAPLMQLAADPGWL
ERAENCLILGPSGVGKTHLATGVSKKMLEFGKRVKFFAANALVQQLQQAKLQLQLHPMLKKLDRYDLLILDDLGYCKKSE
AETSVLFELIAHRYERKSLLITANQPFSQWDDIFTDSMMAVAAIDRLIHHGLIIEIQADSYRRKSATQRTAQTQSPPQKS
QSK

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 27702; Mature: 27702

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHWESIESQAMQENWSYAEFLLALCETEAQRREQARLKRALTEARLPNAKSFTNFDFS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
HCPQLNPAPLMQLAADPGWLERAENCLILGPSGVGKTHLATGVSKKMLEFGKRVKFFAAN
HCCCCCCHHHHHHHCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALVQQLQQAKLQLQLHPMLKKLDRYDLLILDDLGYCKKSEAETSVLFELIAHRYERKSLL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
ITANQPFSQWDDIFTDSMMAVAAIDRLIHHGLIIEIQADSYRRKSATQRTAQTQSPPQKS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCCC
QSK
CCC
>Mature Secondary Structure
MLTHWESIESQAMQENWSYAEFLLALCETEAQRREQARLKRALTEARLPNAKSFTNFDFS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
HCPQLNPAPLMQLAADPGWLERAENCLILGPSGVGKTHLATGVSKKMLEFGKRVKFFAAN
HCCCCCCHHHHHHHCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALVQQLQQAKLQLQLHPMLKKLDRYDLLILDDLGYCKKSEAETSVLFELIAHRYERKSLL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
ITANQPFSQWDDIFTDSMMAVAAIDRLIHHGLIIEIQADSYRRKSATQRTAQTQSPPQKS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCCC
QSK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]