Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340520
Identifier: 158340520
GI number: 158340520
Start: 67480
End: 68097
Strand: Direct
Name: 158340520
Synonym: AM1_C0065
Alternate gene names: NA
Gene position: 67480-68097 (Clockwise)
Preceding gene: 158340519
Following gene: 158340523
Centisome position: 24.71
GC content: 54.69
Gene sequence:
>618_bases ATGACTCCCCCAATCGTCGCCCTCAACCCCAAGCCTATCCCTCAGACCATCCCACAACTACCTAAGTCCGTCCCTTCCTC CCTCAAACTGGTTAGTAGGACAGCATTTCCTAAGGAAACACCGGAAGGCACCCGGCCACCCAAGCGAGAACAAGGGTATG GAGAGCTGGGAGGAATACGCCGGAGTTCTAGACGAGCTTCCCAGACAACCAGACTAAAGAAAGTACCTCATTCGACATCC TCTGAAACCCTCCAGGTCAATCAACCGCGAACTTCTAGAGAATCAGCAGAGCTGGAGAGGCGATTCAGGAATCTGGAGCT GCGCCAGAAGAATCTAGTTGAGCAAGTCAGTAAGAGAGGGGAGCTGGAGTATCTGGCTGTTGCCAAGAATGGGGCTGGAC GATACTGGATTACCGTGGCAGGGACGGGGAAGCCTTTTATGAGGGAATCGTTTGCTACACCTGGGTTCTGTTGGGAGTGT GCCGTTGAGATTGAGGCGAACTTTGAGATCCTTCAGGTGATAGAGCTACGGCCACCGGAGACTATCGAGCGGATTGAAGA GATGGTCCAGGCGGTGTTGGAGCGGGAGCGGGTTGCGGAGAGCTGGGGTTGGGGGTGA
Upstream 100 bases:
>100_bases TACAGAAGTAGGAAATGGTGTTTATCTGTTTGCTCCTCAAACTTTTCCAATTGTGAAACAATCCAAGTATTGAGACTTTA GTGAATTTGAGAATTCCGCA
Downstream 100 bases:
>100_bases CACCGGTCTCTGCTGTTTTGTTCTTGGATACTTCATCGGGCTGAGTATCTGCTCTTTCCAGGACAAATCCTCAATTCAGA GTAATTCTGGGTGAAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTPPIVALNPKPIPQTIPQLPKSVPSSLKLVSRTAFPKETPEGTRPPKREQGYGELGGIRRSSRRASQTTRLKKVPHSTS SETLQVNQPRTSRESAELERRFRNLELRQKNLVEQVSKRGELEYLAVAKNGAGRYWITVAGTGKPFMRESFATPGFCWEC AVEIEANFEILQVIELRPPETIERIEEMVQAVLERERVAESWGWG
Sequences:
>Translated_205_residues MTPPIVALNPKPIPQTIPQLPKSVPSSLKLVSRTAFPKETPEGTRPPKREQGYGELGGIRRSSRRASQTTRLKKVPHSTS SETLQVNQPRTSRESAELERRFRNLELRQKNLVEQVSKRGELEYLAVAKNGAGRYWITVAGTGKPFMRESFATPGFCWEC AVEIEANFEILQVIELRPPETIERIEEMVQAVLERERVAESWGWG >Mature_204_residues TPPIVALNPKPIPQTIPQLPKSVPSSLKLVSRTAFPKETPEGTRPPKREQGYGELGGIRRSSRRASQTTRLKKVPHSTSS ETLQVNQPRTSRESAELERRFRNLELRQKNLVEQVSKRGELEYLAVAKNGAGRYWITVAGTGKPFMRESFATPGFCWECA VEIEANFEILQVIELRPPETIERIEEMVQAVLERERVAESWGWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23222; Mature: 23091
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPIVALNPKPIPQTIPQLPKSVPSSLKLVSRTAFPKETPEGTRPPKREQGYGELGGIR CCCCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH RSSRRASQTTRLKKVPHSTSSETLQVNQPRTSRESAELERRFRNLELRQKNLVEQVSKRG HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC ELEYLAVAKNGAGRYWITVAGTGKPFMRESFATPGFCWECAVEIEANFEILQVIELRPPE CEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCCCH TIERIEEMVQAVLERERVAESWGWG HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPPIVALNPKPIPQTIPQLPKSVPSSLKLVSRTAFPKETPEGTRPPKREQGYGELGGIR CCCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH RSSRRASQTTRLKKVPHSTSSETLQVNQPRTSRESAELERRFRNLELRQKNLVEQVSKRG HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC ELEYLAVAKNGAGRYWITVAGTGKPFMRESFATPGFCWECAVEIEANFEILQVIELRPPE CEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCCCH TIERIEEMVQAVLERERVAESWGWG HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA